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WormBase Tree Display for Gene: WBGene00006996

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Name Class

WBGene00006996SMapS_parentSequenceC08B11
IdentityVersion1
Name (5)
DB_infoDatabaseAceViewgene2I309
WormQTLgeneWBGene00006996
WormFluxgeneWBGene00006996
NDBlocus_tagCELE_C08B11.1
PanthergeneCAEEL|WormBase=WBGene00006996|UniProtKB=P21541
familyPTHR12904
NCBIgene174284
RefSeqproteinNM_063276.7
SwissProtUniProtAccP21541
TREEFAMTREEFAM_IDTF313007
UniProt_GCRPUniProtAccP21541
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:44WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDSC08B11.1
Corresponding_transcriptC08B11.1.1
Other_sequence (24)
Associated_featureWBsf657923
WBsf976496
WBsf976497
WBsf976498
WBsf981231
WBsf988633
WBsf988634
WBsf221670
WBsf221671
Experimental_infoRNAi_result (11)
Expr_patternExpr1021831
Expr1032992
Expr1144124
Expr2018209
Expr2036347
Drives_constructWBCnstr00034047
Construct_productWBCnstr00001756
WBCnstr00001757
WBCnstr00034047
AntibodyWBAntibody00001233
WBAntibody00002713
WBAntibody00002714
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00034761:hlh-30_downregulated
WBPaper00037682:sma-2_upregulated
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:fog-2(q71)_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Metformin_downregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056165:MINA-1_interacting_mRNA
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057154:HeatShock_upregulated_miRNA-target
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00059174:MEG-3_interacting
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059440:LAG-1_interacting_WholeAnimal
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059763:neuron_expressed
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060445:nfki-1(cer1)_downregulated_L1
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061340:FLP
WBPaper00061527:hrdl-1_3731-lst-4_2238
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00061902:CAMT-1_interacting
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
WBPaper00062672:let-418(n3536)_downregulated
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064055:trl-1(cas1077)_upregulated_non-starved
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00064502:spe-44(fx110)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_4_2
cgc4489_group_2
WBPaper00025032:cluster_41
WBPaper00025032:cluster_66
WBPaper00025099:MA_specific
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031832:slr-2_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_3
WBPaper00032948:StarveUp2
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00037611:GLD-2-associated
WBPaper00037611:RNP-8-associated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040963:TA300_down
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042548:miRISC_enriched
WBPaper00044535:male_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitroguanidine_regulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(41_min)
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_E
[cgc6390]:mixed_oogenesis-somatic
Interaction (164)
Map_infoMapIIPosition0.63818Error0.002141
Well_ordered
PositivePositive_cloneC08B11Inferred_automaticallyFrom sequence, transcript, pseudogene data
C47C7
YK852
Mapping_data2_point775
776
779
780
781
782
Multi_point698
699
703
704
705
1296
1389
4580
5630
Pos_neg_data (17)
Reference (49)
MethodGene