WormBase Tree Display for Gene: WBGene00004798

WBGene00004798 SMap: S_parent: Sequence: F43D9
  Identity: Version: 1
    Name: CGC_name: sip-1 Person_evidence: WBPerson1414
      Sequence_name: F43D9.4
      Molecular_name: F43D9.4
        F43D9.4.1
        CE00994
      Other_name: SIP/1
        sec-1
        CELE_F43D9.4 Accession_evidence: NDB BX284603
      Public_name: sip-1
    DB_info: Database: AceView gene 3L596
        WormQTL gene WBGene00004798
        WormFlux gene WBGene00004798
        NDB locus_tag CELE_F43D9.4
        Panther gene CAEEL|WormBase=WBGene00004798|UniProtKB=Q20363
          family PTHR45640
        NCBI gene 176471
        RefSeq protein NM_066915.5
        SwissProt UniProtAcc Q20363
        UniProt_GCRP UniProtAcc Q20363
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sip
    Allele (18)
    Legacy_information: [C.elegansII] NMK. Expression in gonad and early embryo increased after treatment with > 0.2 mM cadmium. Encodes novel protein related to heat shock proteins. [CR]
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (36)
    Paralog (17)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: F43D9.4
    Corresponding_transcript: F43D9.4.1
    Other_sequence (50)
    Associated_feature: WBsf651460
      WBsf667395
      WBsf667396
      WBsf976005
      WBsf976006
      WBsf976007
      WBsf976008
      WBsf976009
      WBsf227467
      WBsf227468
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1607
      Expr1608
      Expr12380
      Expr14422
      Expr15512
      Expr1025283
      Expr1032381
      Expr1151051
      Expr2015821
      Expr2034054
    Drives_construct: WBCnstr00035382
      WBCnstr00040852
      WBCnstr00042203
    Construct_product: WBCnstr00035382
      WBCnstr00042203
    Antibody: WBAntibody00001798
    Microarray_results (21)
    Expression_cluster: WBPaper00024704:Soluble_protein
      WBPaper00026640:Development_Group_II
      WBPaper00026640:embryo-to-L1_downregulated
      WBPaper00027057:DCR-1_interacting_embryo
      WBPaper00030894:daf-2(e1370ts)_upregulated
      WBPaper00031040:Cluster_4
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00033070:Elbe_upregulated
      WBPaper00037047:aging_accelerated_insoluble_protein
      WBPaper00037047:insoluble_protein
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_CoreEnriched
      WBPaper00037950:dopaminergic-neurons_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:hypodermis_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038289:oocyte_protein
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00040134:nhr-49(RNAi)_regulated_protein
      WBPaper00040446:insoluble_protein
      WBPaper00040965:lipid-droplet_associated_protein
      WBPaper00041072:UTX-1_interacting_protein
      WBPaper00041954:ethanol_upregulated
      WBPaper00042477:RSR-2_complex
      WBPaper00043951:insoluble_protein_day16_N2
      WBPaper00043951:Nascent-polypeptide-associated
      WBPaper00044005:DAF-16_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044616:alg-3-4_downregulated_gene
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:rising_dev_expression
      WBPaper00044746:aging_upregulated_Day5
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(gk119)_downregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045257:bar-1(ga80)_upregulated
      WBPaper00045303:ZK1236.1(tm4178)_downregulated
      WBPaper00045316:prg-1_downregulated_L4
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045521:Oogenic
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00046012:tdp-1(ok803)_downregulated
      WBPaper00046446:rapid-synthesized_YoungAdult
      WBPaper00046497:B.thuringiensis_upregulated_protein
      WBPaper00046981:daf-2(e1370)_upregulated_lipid-droplet
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048762:FOG-3_associated
      WBPaper00048910:mRNA-interacting_protein
      WBPaper00048923:Aging_regulated
      WBPaper00048988:daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049083:post-dauer-development_upregulated
      WBPaper00049266:trx-1(ok1449)_regulated_unstressed
      WBPaper00049325:CB4856_vs_N2_DEG
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050094:glp-1(gf)_downregulated
      WBPaper00050332:daf-16(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050522:mafr-1(tm6082)_downregulated
      WBPaper00050599:nicotine(0.01mM)_upregulated
      WBPaper00050636:aging_regulated_insoluble_protein
      WBPaper00050686:glp-1(e2141)_downregulated
      WBPaper00050698:DEP-1_interacting
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:ash-2(RNAi)_regulated_intestine
      WBPaper00051039:germline_enriched
      WBPaper00051069:isp-1(qm150)_upregulated
      WBPaper00051245:body-wall-muscle_nucleus_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051265:F1_hrde-1(tm1200)_downregulated
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00052868:ALA_downregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:lin-15B(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053814:25C_downregulated_PY79
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00054792:FOG-3_interacting
      WBPaper00054872:egl-9(sa307)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055049:S.gordonii_downregulated
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055969:electromagnetic-field_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056169:rrf-3(pk1426)_upregulated_L4
      WBPaper00056284:ints-5(RNAi)_downregulated
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056900:ERH-2_interacting
      WBPaper00056900:PID-3_interacting
      WBPaper00056900:TOFU-6_interacting
      WBPaper00056900:TOST-1_interacting
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057288:Cold_downregulated_protein
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058598:mex-3(eu149)_downregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058691:CFP-1_interacting_protein
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058711:paraquat_upregulated
      WBPaper00059027:neuron-synapses_enriched
      WBPaper00059254:CSR-1_interacting
      WBPaper00059254:PRG-1_interacting
      WBPaper00059328:mrps-5(RNAi)_downregulated_protein
      WBPaper00059440:GLP-1_represseded
      WBPaper00059440:LAG-1_activated_4hr-auxin
      WBPaper00059440:LAG-1_repressed_48hr-auxin
      WBPaper00059605:MUT-16_interacting
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059728:5ug_cholesterol_downregulated
      WBPaper00059728:20ug_cholesterol_downregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060458:rnf-5(tm794)_regulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060871:M.humicola-infection_48h_regulated
      WBPaper00060908:TEBP-1_interacting
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061045:Y56A3A.22(cck200)_downregulated
      WBPaper00061203:let-418(n3536)_downregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061340:Germline
      WBPaper00061377:MYRF-1_interacting
      WBPaper00061422:let-607(RNAi)_regulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:pgl-1-wago-2
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00061651:Germline_enriched
      WBPaper00061651:Sperm_enriched
      WBPaper00061699:daf-18(ok480)_downregulated
      WBPaper00061818:AFD_enriched_protein
      WBPaper00061818:ELKS-1_interacting
      WBPaper00062002:Day4-adult_secretome
      WBPaper00062056:lin-37(n758)_downregulated
      WBPaper00062118:neural-HSF-1_upregulated
      WBPaper00062143:PQN-59_interacting
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062197:mec-8_upregulated
      WBPaper00062293:isp-1(qm150)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062347:blmp-1(tm548)_upregulated
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00062456:doxycycline_downregulated_CB4856_protein
      WBPaper00062456:doxycycline_downregulated_N2_protein
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062590:Aging_upregulated_hypodermis
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00063976:micu-1(bon20)_downregulated
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein
      WBPaper00064055:trl-1(cas1077)_downregulated_starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064201:SNA-1_interacting
      WBPaper00064201:SNA-3_interacting
      WBPaper00064315:mes-3(bn199)_downregulated_PGCs
      WBPaper00064315:mes-4(bn73)_downregulated_EGCs
      WBPaper00064502:nhr-23(kry61);spe-44(fx110)_upregulated
      WBPaper00064502:spe-44(fx110)_upregulated
      WBPaper00064505:tamoxifen_upregulated
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064602:egl-9(sa307)_upregulated
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064788:ketamine_upregulated
      WBPaper00064933:E.coli-binding_secret_protein
      WBPaper00064952:Day5_vs_L4_upregulated_20C
      WBPaper00064952:Day5_vs_L4_upregulated_25C
      WBPaper00064952:Day10_vs_L4_upregulated_20C
      WBPaper00064952:Day10_vs_L4_upregulated_25C
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065288:mdt-15(tm2182)_upregulated
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065373:sek-1(km4)_upregulated_Ref
      WBPaper00065581:hpk-1(pk1393)_downregulated
      WBPaper00065623:1
      WBPaper00065835:Day5_vs_Day1_upregulated
      WBPaper00065841:3_0
      WBPaper00065877:rege-1(imm070)_downregulated_OP50
      WBPaper00065926:pgph-2(overepxreesion)_upregulated
      WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:hda-3(ok1991)_downregulated
      WBPaper00066085:sin-3(syb2172)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066118:cyclobutrifluram_upregulated
      WBPaper00066204:CdCl2_downregulated_mRNA
      cgc4386_cluster_4_1
      cgc4489_group_9
      WBPaper00005124:cholesterol_10-9M_regulated
      WBPaper00025032:cluster_3
      WBPaper00025032:cluster_21
      WBPaper00025099:NI_specific
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_B
      WBPaper00037113:CPF_16C_down-regulated
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00038172:aak-2overexpression_up_regulated
      WBPaper00038172:crh-1null_down_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00039835:ifg-1_downregulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040963:TA100_down
      WBPaper00040963:TA200_down
      WBPaper00040963:TA300_down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00049311:Ag-MNP_regulated
      WBPaper00049311:AgNO3_regulated
      WBPaper00051387:Triclosan_downregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_3
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_E
      [cgc6390]:intrinsic
    Interaction (1036)
    WBProcess: WBbiopr:00000053
  Map_info: Map: III Position: 2.93581 Error: 0.122939
    Positive: Positive_clone: CR#7A-2
        F43D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5626
    Pseudo_map_position
  Reference (32)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene