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WormBase Tree Display for Gene: WBGene00001034

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Name Class

WBGene00001034SMapS_parentSequenceR74
IdentityVersion1
NameCGC_namednj-16Person_evidenceWBPerson625
Sequence_nameR74.4
Molecular_nameR74.4a
R74.4a.1
CE01057
R74.4b
CE43575
R74.4b.1
Other_nameCELE_R74.4Accession_evidenceNDBBX284603
Public_namednj-16
DB_infoDatabaseAceViewgene3F281
WormQTLgeneWBGene00001034
WormFluxgeneWBGene00001034
NDBlocus_tagCELE_R74.4
PanthergeneCAEEL|WormBase=WBGene00001034|UniProtKB=C1P627
familyPTHR44272
NCBIgene175540
RefSeqproteinNM_001267961.2
NM_001267962.2
TREEFAMTREEFAM_IDTF316045
TrEMBLUniProtAccC1P627
Q22028
UniProt_GCRPUniProtAccC1P627
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdnj
Allele (31)
RNASeq_FPKM (74)
Contained_in_operonCEOP3865
Ortholog (24)
ParalogWBGene00001019Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001022Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001031Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001038Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001040Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001042Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001044Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThis gene encodes a protein containing a DnaJ ('J') domain.Paper_evidenceWBPaper00012768
WBPaper00012859
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in several structures, including ABplapaaapa; ABprapaaapa; germ line; intestine; and neurons based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by nine chemicals including Zidovudine; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DnaJ domain and Chaperone J-domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR74.4a
R74.4b
Corresponding_transcriptR74.4a.1
R74.4b.1
Other_sequence (46)
Associated_featureWBsf645066
WBsf645067
WBsf645068
WBsf224691
WBsf224692
Experimental_infoRNAi_resultWBRNAi00106331Inferred_automaticallyRNAi_primary
WBRNAi00052050Inferred_automaticallyRNAi_primary
WBRNAi00076624Inferred_automaticallyRNAi_primary
WBRNAi00034977Inferred_automaticallyRNAi_primary
WBRNAi00017918Inferred_automaticallyRNAi_primary
WBRNAi00005040Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Drives_constructWBCnstr00037129
Construct_productWBCnstr00037129
Microarray_results (22)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00045974:NSM_enriched_totalRNA_tiling
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051555:atm-1(gk186)_regulated_protein
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053599:mitosis_vs_meiosis_upregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056826:SGP_biased
WBPaper00057254:MWCNT_downregulated_mRNA
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059440:LAG-1_interacting_germline
WBPaper00059440:LAG-1_interacting_WholeAnimal
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00061340:AIZ
WBPaper00061340:DD
WBPaper00061340:MC
WBPaper00061340:Neuroblast_AIZ_FLP
WBPaper00061340:PVP
WBPaper00061340:RIA
WBPaper00061340:RID
WBPaper00061527:chn-1_12866-rab-21
WBPaper00061527:lst-4_22151-F46F11.6_12556
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00064716:paraquat_upregulated
WBPaper00065158:AFD_depleted
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00025032:cluster_176
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00028474:dys-1_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032948:FedUp
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Cadmium_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(186_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_ME
Interaction (24)
Map_infoMapIIIPosition-3.70053Error0.002861
PositivePositive_cloneR74Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene