| WBGene00003864 | SMap | S_parent | Sequence | CHROMOSOME_IV |
|---|
| Identity | Version | 1 |
| | Name | CGC_name | oma-1 | Person_evidence | WBPerson374 |
| | | Sequence_name | C09G9.6 |
| | | Molecular_name | C09G9.6 |
| | | | C09G9.6.1 |
| | | | CE03005 |
| | | Other_name | moe-1 |
| | | | CELE_C09G9.6 | Accession_evidence | NDB | BX284604 |
| | | Public_name | oma-1 |
| | DB_info | Database (11) |
| | Species | Caenorhabditis elegans |
| | History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace |
| | Status | Live |
| Gene_info | Biotype | SO:0001217 |
| | Gene_class | oma |
| | Allele (56) |
| | Strain | WBStrain00035069 |
| | | WBStrain00035066 |
| | | WBStrain00035067 |
| | | WBStrain00035068 |
| | | WBStrain00040433 |
| | | WBStrain00040434 |
| | | WBStrain00048324 |
| | | WBStrain00052677 |
| | RNASeq_FPKM (74) |
| | GO_annotation (55) |
| | Contained_in_operon | CEOP4312 |
| | Ortholog (51) |
| | Paralog (20) |
| | Structured_description | Concise_description | oma-1 encodes a zinc finger protein of the TIS11 finger type that is paralogous to OMA-2; while either oma-1 or oma-2 individually have no obvious mutant phenotype, oma-1 and oma-2 doubly mutant animals show defects in oocyte maturation, indicating that the two genes function redundantly in this process; whereas normal oocytes are released from meiotic prophase I arrest during oocyte maturation, oma-1;oma-2 mutant oocytes initiate, but fail to complete, maturation, arresting at a defined point in meiotic prophase I; the meiotic arrest of oma-1;oma-2 mutant oocytes is suppressed by wee-1.3(RNAi), implying that progression through meiotic prophase I is critically dependent on inhibition of WEE-1.3 by either OMA-1 or OMA-2; OMA-1 is expressed primarily in maturing oocytes, is cytoplasmic and visible prior to cellularization. | Paper_evidence | WBPaper00005198 |
| | | | | Curator_confirmed | WBPerson1843 |
| | | | | | WBPerson567 |
| | | | | Date_last_updated | 19 Mar 2012 00:00:00 |
| | | Automated_description | Enables mRNA 3'-UTR AU-rich region binding activity and mRNA regulatory element binding translation repressor activity. Involved in several processes, including negative regulation of cell differentiation; oocyte development; and regulation of reproductive process. Located in P granule and centrosome. Part of messenger ribonucleoprotein complex. Expressed in several structures, including head muscle; neurons; oocyte; somatic nervous system; and vulva. Is an ortholog of human ZFP36L1 (ZFP36 ring finger protein like 1) and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 |
| | | | | Curator_confirmed | WBPerson324 |
| | | | | | WBPerson37462 |
| | | | | Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase |
| | | | | Date_last_updated | 29 Nov 2023 00:00:00 |
| Disease_info | Potential_model | EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) |
| Molecular_info | Corresponding_CDS | C09G9.6 |
| | Corresponding_transcript | C09G9.6.1 |
| | Other_sequence | XIC01512_1 |
| | | HG11531 |
| | | XI03775 |
| | | SRC08713_1 |
| | | FC813056.1 |
| | Associated_feature (15) |
| | Gene_product_binds | WBsf034245 |
| | Transcription_factor | WBTranscriptionFactor000116 |
| Experimental_info | RNAi_result (29) |
| | Expr_pattern (16) |
| | Drives_construct (13) |
| | Construct_product (14) |
| | Antibody | WBAntibody00000486 |
| | | WBAntibody00000547 |
| | | WBAntibody00001073 |
| | | WBAntibody00001074 |
| | | WBAntibody00001087 |
| | | WBAntibody00001664 |
| | | WBAntibody00002447 |
| | Microarray_results (20) |
| | Expression_cluster | WBPaper00028451:Oogenic_protein |
| | | WBPaper00028867:HLH-1_induced_TF |
| | | WBPaper00031040:TGF-beta_adult_downregulated |
| | | WBPaper00032097:CGH-1-associated-mRNA |
| | | WBPaper00035269:cde-1_regulated |
| | | WBPaper00037047:aging_accelerated_insoluble_protein |
| | | WBPaper00037047:insoluble_protein |
| | | WBPaper00037950:A-class-motor-neurons_L1-larva_expressed |
| | | WBPaper00037950:AVE-neuron_L1-larva_expressed |
| | | WBPaper00037950:BAG-neuron_blastula-embryo_expressed |
| | | WBPaper00037950:bodywall-muscle_L1-larva_expressed |
| | | WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed |
| | | WBPaper00037950:coelomocytes_L2-larva_expressed |
| | | WBPaper00037950:dopaminergic-neurons_L1-larva_expressed |
| | | WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed |
| | | WBPaper00037950:germline-precursors_blastula-embryo_expressed |
| | | WBPaper00037950:hypodermis_L1-larva_expressed |
| | | WBPaper00037950:hypodermis_L3-L4-larva_expressed |
| | | WBPaper00037950:pharyngeal-muscle_L1-larva_expressed |
| | | WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed |
| | | WBPaper00041222:unc-120(st364)_downregulated |
| | | WBPaper00044656:tatn-1(qd182)_downregulated |
| | | WBPaper00044736:rising_dev_expression |
| | | WBPaper00044760:germline_specific |
| | | WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated |
| | | WBPaper00045050:drh-3 (ne4253)_downregulated |
| | | WBPaper00045420:fertilization_downregulated_transcript |
| | | WBPaper00045521:Oogenic |
| | | WBPaper00045618:puf-8_downregulated |
| | | WBPaper00045934:wrn-1(gk99)_upregulated |
| | | WBPaper00046012:tdp-1(ok803)_downregulated |
| | | WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h |
| | | WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h |
| | | WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h |
| | | WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h |
| | | WBPaper00048611:MnCl2_downregulated |
| | | WBPaper00048762:FOG-3_associated |
| | | WBPaper00048988:neuron_expressed |
| | | WBPaper00049159:Microwave_upregulated_L4 |
| | | WBPaper00049498:npr-1(ur89)_regulated_6 |
| | | WBPaper00049920:Glucose-Diet_downregulated_N2 |
| | | WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi) |
| | | WBPaper00049942:hsf-1(RNAi)_upregulated |
| | | WBPaper00050488:adult_vs_dauer_regulated_N2_20C |
| | | WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C |
| | | WBPaper00050522:mafr-1(tm6082)_downregulated |
| | | WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult |
| | | WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult |
| | | WBPaper00050990:body-muscle_expressed |
| | | WBPaper00050990:hypodermis_expressed |
| | | WBPaper00050990:NMDA-neuron_expressed |
| | | WBPaper00050990:pharynx_expressed |
| | | WBPaper00051039:germline_enriched |
| | | WBPaper00051265:F1_morc-1(tm6048)_downregulated |
| | | WBPaper00051265:F4_morc-1(tm6048)_upregulated |
| | | WBPaper00051310:LIN-41_interacting |
| | | WBPaper00051404:alg-1(gk214)_upregulated |
| | | WBPaper00052884:emb-4(hc60)_downregulated |
| | | WBPaper00053154:human-amyloid-beta_tau_regulated |
| | | WBPaper00053184:sma-2(rax5)_downregulated |
| | | WBPaper00053184:sma-4(rax3)_downregulated |
| | | WBPaper00053295:lin-22(icb38)_downregulated |
| | | WBPaper00053302:alovudine_24h_regulated |
| | | WBPaper00053302:stavudine_24h_regulated |
| | | WBPaper00053302:zidovudine_24h_regulated |
| | | WBPaper00053302:zidovudine_72h_regulated |
| | | WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq |
| | | WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_embryo_SMARTseq |
| | | WBPaper00053321:PGCs_enriched_NuGen |
| | | WBPaper00053388:dauer_regulated_Cluster2 |
| | | WBPaper00053599:mitosis_vs_meiosis_downregulated |
| | | WBPaper00053599:oocyte_vs_mitosis_downregulated |
| | | WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated |
| | | WBPaper00053606:N2_vs_elt-2(ca15)_upregulated |
| | | WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated |
| | | WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated |
| | | WBPaper00054191:H3.3(null)_L1_upregulated |
| | | WBPaper00054792:FOG-3_interacting |
| | | WBPaper00055049:S.gordonii_downregulated |
| | | WBPaper00055103:thoc-5(wy822)_downregulated |
| | | WBPaper00055354:eat-2(ad1116)_upregulated |
| | | WBPaper00055354:Metformin_downregulated |
| | | WBPaper00055354:Rapamycin-Allantoin_upregulated |
| | | WBPaper00055354:Rapamycin_upregulated |
| | | WBPaper00055648:germline_expressed |
| | | WBPaper00055862:antimycin_damt-1(gk961032)_regulated |
| | | WBPaper00055941:atfs-1(et15)_downregulated |
| | | WBPaper00055971:nhl-2(ok818)_25C_upregulated |
| | | WBPaper00056034:pals-22(jy3)_downregulated |
| | | WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047) |
| | | WBPaper00056284:ints-5(RNAi)_downregulated |
| | | WBPaper00056290:hsp-6(mg585)_downregulated |
| | | WBPaper00056443:sek-1(km4)_downregulated |
| | | WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated |
| | | WBPaper00056826:hmc_biased |
| | | WBPaper00057041:spc-1(cas971)_upregulated |
| | | WBPaper00057041:unc-70(cas983)_upregulated |
| | | WBPaper00057154:HeatShock_downregulated_mRNA |
| | | WBPaper00057154:HeatShock_upregulated_miRNA-target |
| | | WBPaper00057288:Cold_downregulated_transcript |
| | | WBPaper00058598:mex-1(or286)_downregulated |
| | | WBPaper00058598:mex-3(eu149)_downregulated |
| | | WBPaper00058598:sin-3(tm1276)_upregulated |
| | | WBPaper00058691:cfp-1(tm6369)_upregulated |
| | | WBPaper00058691:sin-3(tm1276)_upregulated |
| | | WBPaper00059027:neuron-synapses_enriched |
| | | WBPaper00059174:MEG-3_interacting |
| | | WBPaper00059254:CSR-1_interacting |
| | | WBPaper00059664:srbc-48(ac23)_downregulated |
| | | WBPaper00059728:5ug_cholesterol_downregulated |
| | | WBPaper00059739:hira-1(gk835598)_upregulated_L4 |
| | | WBPaper00060014:set-2(tm1630)_upregulated |
| | | WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi) |
| | | WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi) |
| | | WBPaper00060358:B.thuringiensis_pathogen_regulated_N2 |
| | | WBPaper00060445:ikb-1(nr2027)_upregulated_L4 |
| | | WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4 |
| | | WBPaper00060445:nfki-1(cer1)_upregulated_L4 |
| | | WBPaper00060459:bcat-1(RNAi)_downregulated |
| | | WBPaper00060661:sensory-neuron_depleted |
| | | WBPaper00060683:hlh-11(ko1)_downregulated |
| | | WBPaper00060811:L1_vs_adult_downregulated_neural |
| | | WBPaper00060871:M.humicola-infection_48h_regulated |
| | | WBPaper00060909:atfs-1(cmh15)_upregulated |
| | | WBPaper00061007:S.aquatilis_downregulated |
| | | WBPaper00061045:Y56A3A.22(cck200)_downregulated |
| | | WBPaper00061203:sin-3(tm1276)_downregulated |
| | | WBPaper00061203:spr-1(ok2144)_downregulated |
| | | WBPaper00061274:hypergravity_15xg_upregulated |
| | | WBPaper00061340:ALM_BDU |
| | | WBPaper00061340:ASG_AWA |
| | | WBPaper00061340:ASI_parent |
| | | WBPaper00061340:Neuroblast_ASG_AWA |
| | | WBPaper00061340:OLL_parent |
| | | WBPaper00061340:OLQ_parent |
| | | WBPaper00061527:puf-3-oma-2_18268 |
| | | WBPaper00061753:csr-1(tor159)_downregulated_25C |
| | | WBPaper00061818:ELKS-1_interacting |
| | | WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR |
| | | WBPaper00062118:neural-HSF-1_upregulated |
| | | WBPaper00062123:GLH-1_interacting |
| | | WBPaper00062159:hda-2(ok1479)_downregulated |
| | | WBPaper00062325:muscle_depleted_coding-RNA |
| | | WBPaper00062440:crh-1(n3315)_upregulated |
| | | WBPaper00062446:nhr-8(hd117)_downregulated |
| | | WBPaper00062498:PPM-1.D_interacting |
| | | WBPaper00062587:lsl-1(ljm1)_downregulated |
| | | WBPaper00062587:lsl-1(tm4769)_downregulated |
| | | WBPaper00062590:Aging_upregulated_neuron |
| | | WBPaper00062669:extracellular-vesicle_protein |
| | | WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20) |
| | | WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20) |
| | | WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141) |
| | | WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated |
| | | WBPaper00064502:spe-44(fx110)_upregulated |
| | | WBPaper00064716:paraquat_upregulated |
| | | WBPaper00064871:hypoxia_upregulated_F1 |
| | | WBPaper00065096:25C_vs_20C_upregulated |
| | | WBPaper00065096:Day10_vs_Day1_upregulated |
| | | WBPaper00065158:25C_vs_15C_upregulated_AFD |
| | | WBPaper00065373:Cisplatin_upregulated_WT |
| | | WBPaper00065373:sek-1(km4)_downregulated_cisplatin |
| | | WBPaper00065975:P-body_vs_WholeAnimal_enriched |
| | | WBPaper00065984:pals-17(syb3980)_upregulated |
| | | WBPaper00065993:glp-1(e2141)_downregulated |
| | | WBPaper00066110:tetraploid_vs_diploid_downregulated |
| | | WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14 |
| | | cgc4489_group_9 |
| | | WBPaper00005124:cholesterol_10-9M_regulated |
| | | WBPaper00025032:cluster_56 |
| | | WBPaper00026929:sir-2.1_overexpression_regulated |
| | | WBPaper00032165:differentially_expressed_with_age_medoid_3 |
| | | WBPaper00035084:L1_enriched_AIN-2_IP |
| | | WBPaper00035873:dpy-9_regulated |
| | | WBPaper00035873:dpy-10_regulated |
| | | WBPaper00035905:FBF-1_Associated |
| | | WBPaper00036130:mir-243_down_regulated |
| | | WBPaper00036286:Pattern_F |
| | | WBPaper00037147:heatshock_upregulated |
| | | WBPaper00037611:RNP-8-associated |
| | | WBPaper00037901:GLD-1_mRNA_targets |
| | | WBPaper00040426:CYD-1_CDK-4_upregulated |
| | | WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2 |
| | | WBPaper00040858:eQTL_age_regulated_developing |
| | | WBPaper00040858:eQTL_regulated_developing |
| | | WBPaper00041002:HF_11d_2.0mM_Up |
| | | WBPaper00041606:CE_B.thuringiensis-DB27_regulated |
| | | WBPaper00041606:CE_S.marcescens_regulated |
| | | WBPaper00041606:CE_X.nematophila_regulated |
| | | WBPaper00041939:control_vs_UVC-EtBr-exposed_51h |
| | | WBPaper00042331:a-SWCNTs_downregulated |
| | | WBPaper00045263:0.1mM-paraquat_upregulated |
| | | WBPaper00048624:hlh-25(ok1710)_upregulated |
| | | WBPaper00048989:eat-2(ad465)_rapamycin_upregulated |
| | | WBPaper00048989:N2_rapamycin_downregulated |
| | | WBPaper00051387:Triclosan_downregulated |
| | | WBPaper00056330:mrps-5(RNAi)_downregulated |
| | | [cgc5767]:cluster_3 |
| | | [cgc5767]:expression_class_M |
| | | [cgc5767]:expression_class_MD |
| | | [cgc5767]:expression_class_MD_pd(41_min) |
| | | [cgc5767]:expression_class_SM |
| | | [cgc5767]:expression_class_SMD |
| | | [cgc6390]:Cluster_E |
| | | [cgc6390]:oogenesis-enriched |
| | Interaction (354) |
| | WBProcess | WBbiopr:00000068 |
| | | WBbiopr:00000073 |
| Map_info | Map | IV | Position | 3.99916 | Error | 0.001096 |
| | Positive | Positive_clone | C09G9 | Inferred_automatically | From sequence, transcript, pseudogene data |
| | Mapping_data | 2_point | 7138 |
| | | Multi_point | 4054 |
| | | | 4056 |
| | | | 4064 |
| | | | 4065 |
| Reference | WBPaper00005198 |
| | WBPaper00005454 |
| | WBPaper00005930 |
| | WBPaper00006085 |
| | WBPaper00010630 |
| | WBPaper00010668 |
| | WBPaper00010802 |
| | WBPaper00012537 |
| | WBPaper00017837 |
| | WBPaper00017838 |
| | WBPaper00018617 |
| | WBPaper00018755 |
| | WBPaper00018768 |
| | WBPaper00018887 |
| | WBPaper00019036 |
| | WBPaper00023917 |
| | WBPaper00024312 |
| | WBPaper00024507 |
| | WBPaper00025650 |
| | WBPaper00025747 |
| | WBPaper00026080 |
| | WBPaper00026378 |
| | WBPaper00026516 |
| | WBPaper00026970 |
| | WBPaper00026975 |
| | WBPaper00027080 |
| | WBPaper00027224 |
| | WBPaper00027238 |
| | WBPaper00027298 |
| | WBPaper00027309 |
| | WBPaper00027310 |
| | WBPaper00027320 |
| | WBPaper00027607 |
| | WBPaper00027739 |
| | WBPaper00028423 |
| | WBPaper00028730 |
| | WBPaper00031129 |
| | WBPaper00031702 |
| | WBPaper00031842 |
| | WBPaper00031867 |
| | WBPaper00032146 |
| | WBPaper00032265 |
| | WBPaper00032287 |
| | WBPaper00033085 |
| | WBPaper00033447 |
| | WBPaper00034932 |
| | WBPaper00035436 |
| | WBPaper00036019 |
| | WBPaper00036909 |
| | WBPaper00037129 |
| | WBPaper00037685 |
| | WBPaper00038491 |
| | WBPaper00038621 |
| | WBPaper00038735 |
| | WBPaper00038743 |
| | WBPaper00039209 |
| | WBPaper00039584 |
| | WBPaper00039588 |
| | WBPaper00039589 |
| | WBPaper00041400 |
| | WBPaper00042062 |
| | WBPaper00042959 |
| | WBPaper00043308 |
| | WBPaper00043745 |
| | WBPaper00043747 |
| | WBPaper00044147 |
| | WBPaper00044760 |
| | WBPaper00045802 |
| | WBPaper00045803 |
| | WBPaper00046178 |
| | WBPaper00048493 |
| | WBPaper00048539 |
| | WBPaper00048543 |
| | WBPaper00050819 |
| | WBPaper00051310 |
| | WBPaper00052021 |
| | WBPaper00052136 |
| | WBPaper00055090 |
| | WBPaper00056632 |
| | WBPaper00057125 |
| | WBPaper00057140 |
| | WBPaper00057808 |
| | WBPaper00057881 |
| | WBPaper00058597 |
| | WBPaper00059332 |
| | WBPaper00061125 |
| | WBPaper00061137 |
| | WBPaper00062120 |
| | WBPaper00062457 |
| | WBPaper00063103 |
| | WBPaper00063533 |
| | WBPaper00063960 |
| | WBPaper00064664 |
| | WBPaper00066192 |
| Picture | WBPicture0000013094 |
| Remark | Weak rescue of the zu405 embryonic lethality [Lin, R][021017 ck1] |
| | Sequence connection based on Lin, R [021017 ck1] |
| | Sequence connection from [Shimada M], [krb 020711] |
| | Postitive method is weak rescue of the zu405 embryonic lethality |
| Method | Gene |
