WormBase Tree Display for Gene: WBGene00003165

WBGene00003165 SMap: S_parent: Sequence: T07H8
  Identity: Version: 1
    Name: CGC_name: mec-1 Person_evidence: WBPerson95
      Sequence_name: T07H8.4
      Molecular_name (31)
      Other_name: che-4
        CELE_T07H8.4 Accession_evidence: NDB BX284605
      Public_name: mec-1
    DB_info: Database: AceView gene 5H445
        WormQTL gene WBGene00003165
        WormFlux gene WBGene00003165
        NDB locus_tag CELE_T07H8.4
        Panther gene CAEEL|WormBase=WBGene00003165|UniProtKB=Q5ZR42
          family PTHR10083
        NCBI gene 188259
        RefSeq protein NM_001380684.1
            NM_001380682.1
            NM_001028949.3
            NM_001028946.6
            NM_001380683.1
            NM_001380680.1
            NM_001380681.1
            NM_171477.7
            NM_001028947.3
            NM_001392539.1
        TREEFAM TREEFAM_ID TF316874
        TrEMBL UniProtAcc Q5ZR42
            Q5ZR36
            H2KZ68
            Q5ZR40
            A5A8R1
            Q5ZR35
            A5A8R2
            Q5ZR39
            H2KZ67
            Q5ZR41
        UniProt_GCRP UniProtAcc Q5ZR42
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:31 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: T07H8.4a
      T07H8.4b
      T07H8.4c
      T07H8.4d
      T07H8.4e
      T07H8.4f
      T07H8.4g
      T07H8.4h
      T07H8.4i
      T07H8.4j
    Corresponding_CDS_history: T07H8.4a:wp131
      T07H8.4b:wp109
      T07H8.4b:wp131
    Corresponding_transcript (11)
    Other_sequence (56)
    Associated_feature: WBsf231924
  Experimental_info: RNAi_result: WBRNAi00103515 Inferred_automatically: RNAi_primary
      WBRNAi00052813 Inferred_automatically: RNAi_primary
      WBRNAi00018412 Inferred_automatically: RNAi_primary
      WBRNAi00089153 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3463
      Expr1026744
      Expr1031500
      Expr1156414
      Expr2013495
      Expr2031729
    Drives_construct: WBCnstr00011403
      WBCnstr00036205
    Construct_product: WBCnstr00036205
    Microarray_results (130)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00040420:FLP_enriched
      WBPaper00041954:ethanol_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00045774:clk-1_downregulated_CoQ10_independent
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050163:let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053295:lin-22(ot267)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058725:sftb-1(cer39)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061210:huIs179_upregulated
      WBPaper00061340:ALM_BDU
      WBPaper00061340:ALM_PLM
      WBPaper00061340:ALN
      WBPaper00061340:mu_int_mu_anal
      WBPaper00061340:PLM
      WBPaper00061340:PVT
      WBPaper00061340:RID
      WBPaper00061340:URX
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061651:ALM_enriched
      WBPaper00061651:AVM_enriched
      WBPaper00061651:PLM_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062197:TRN_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065149:lin-52(n771)_downregulated
      WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065623:75
      WBPaper00065841:6_0
      WBPaper00065841:6_1
      WBPaper00065841:6_2
      WBPaper00065841:6_3
      WBPaper00065841:20_0
      WBPaper00065841:20_1
      WBPaper00065841:20_2
      WBPaper00065841:28_0
      WBPaper00065841:38_0
      WBPaper00065841:51_0
      WBPaper00065841:51_1
      WBPaper00065841:54_0
      WBPaper00065841:115_0
      WBPaper00065841:133_0
      WBPaper00065841:136_0
      WBPaper00065841:138_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066005:RAGA-1_degradation_somatic_upregulated
      cgc4489_group_20
      WBPaper00027111:rrf-2(ok210)_upregulated
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00051304:CEH-23_repressed
      WBPaper00051387:Triclosan_upregulated
    Interaction (45)
    WBProcess: WBbiopr:00000002
  Map_info: Map: V Position: 0.482741 Error: 0.000385
    Well_ordered
    Positive: Inside_rearr: sDf30
        nDf32
      Positive_clone: T07H8 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 127
      Multi_point: 139
        140
        1160
        5340
        5681
      Pos_neg_data: 844
        861
        1746
        3118
        3119
        3120
        3121
        3122
        3123
        9318
        9319
  Reference (72)
  Remark: Sequence connection from [Emtage L, Gu GQ, Chalfie M]
  Method: Gene