Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00013047

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00013047SMapS_parentSequenceY50E8A
IdentityVersion1
NameSequence_nameY50E8A.2
Molecular_nameY50E8A.2
Y50E8A.2.1
CE43100
Other_nameCELE_Y50E8A.2Accession_evidenceNDBBX284605
Public_nameY50E8A.2
DB_infoDatabaseAceViewgene5P206
WormQTLgeneWBGene00013047
WormFluxgeneWBGene00013047
NDBlocus_tagCELE_Y50E8A.2
PanthergeneCAEEL|WormBase=WBGene00013047|UniProtKB=Q9NAF5
familyPTHR22920
NCBIgene190104
RefSeqproteinNM_074235.3
TrEMBLUniProtAccQ9NAF5
UniProt_GCRPUniProtAccQ9NAF5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (16)
RNASeq_FPKM (74)
GO_annotation00096033
00096034
00096035
00096036
00096037
OrthologCBOVI.g6087Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP28.g19237Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4062Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20347Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22043Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22045Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g14346Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3152Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5878Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8409Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_21417.g26663Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_26662.g27444Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18042Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Pan_g8411Panagrellus redivivusFrom_analysisWormBase-Compara
chrV_pilon.g16602Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00218314Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00294468Trichuris murisFrom_analysisWormBase-Compara
Paralog (46)
Structured_descriptionAutomated_descriptionPredicted to be located in cytoskeleton.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY50E8A.2
Corresponding_CDS_historyY50E8A.2:wp195
Corresponding_transcriptY50E8A.2.1
Other_sequenceJI223155.1
Experimental_infoRNAi_resultWBRNAi00020838Inferred_automaticallyRNAi_primary
WBRNAi00057103Inferred_automaticallyRNAi_primary
Expr_patternExpr1016008
Expr1160549
Expr2007762
Expr2026005
Drives_constructWBCnstr00029768
Construct_productWBCnstr00029768
Microarray_results (16)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044736:rising_dev_expression
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00049489:AMsh-glia_enriched
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00050231:male_enriched
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00056161:male_enriched_siRNA
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:Y40H4A.2-ZK1053.2
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_11
WBPaper00026629:L3_male_enriched
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040963:Q200_up
WBPaper00040963:TA300_up
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
[cgc6390]:Cluster_D
[cgc6390]:spermatogenesis-enriched
Map_infoPositivePositive_cloneY50E8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV6.72095
MethodGene