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WormBase Tree Display for Gene: WBGene00011630

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Name Class

WBGene00011630SMapS_parentSequenceT08G11
IdentityVersion1
NameSequence_nameT08G11.3
Molecular_nameT08G11.3
T08G11.3.1
CE42164
Other_nameCELE_T08G11.3Accession_evidenceNDBBX284601
Public_nameT08G11.3
DB_infoDatabaseAceViewgene1J499
WormQTLgeneWBGene00011630
WormFluxgeneWBGene00011630
NDBlocus_tagCELE_T08G11.3
PanthergeneCAEEL|WormBase=WBGene00011630|UniProtKB=Q94012
familyPTHR31516
NCBIgene188307
RefSeqproteinNM_060002.6
TREEFAMTREEFAM_IDTF319394
TrEMBLUniProtAccQ94012
UniProt_GCRPUniProtAccQ94012
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (38)
RNASeq_FPKM (74)
GO_annotation00086931
00086932
00086933
00086934
00086935
00086936
00118854
OrthologWBGene00059978Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00033348Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00138471Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00185061Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g9721Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11378Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15351Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g500Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6752Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7566Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2925Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g190Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28077Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24223Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00650.g13157Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T08G11.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00231.g7578Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05104Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002500Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g8065Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10121100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00100794Pristionchus pacificusFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-051127-27Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:28566Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:33727Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1923061Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1914618Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1562653Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1549779Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1583685Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00010357Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044142Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable microtubule binding activity. Predicted to be located in microtubule cytoskeleton and sperm flagellum. Is an ortholog of human SAXO1 (stabilizer of axonemal microtubules 1) and SAXO2 (stabilizer of axonemal microtubules 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST08G11.3
Corresponding_CDS_historyT08G11.3:wp187
Corresponding_transcriptT08G11.3.1
Other_sequenceAcan_isotig09886
Acan_isotig12392
ACC20736_1
FC549132.1
FC549081.1
Associated_featureWBsf643564
WBsf984534
WBsf984535
WBsf1010289
WBsf218228
Experimental_infoRNAi_resultWBRNAi00052881Inferred_automaticallyRNAi_primary
WBRNAi00004174Inferred_automaticallyRNAi_primary
Expr_patternExpr1010193
Expr1156479
Expr2006008
Expr2024223
Drives_constructWBCnstr00030516
Construct_productWBCnstr00030516
Microarray_results (20)
Expression_clusterWBPaper00037950:dopaminergic-neurons_CoreEnriched
WBPaper00037950:dopaminergic-neurons_embryo_enriched
WBPaper00037950:dopaminergic-neurons_embryo_SelectivelyEnriched
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040209:B.thuringiensis_upregulated_MY15
WBPaper00040209:B.thuringiensis_upregulated_N2
WBPaper00044736:flat_dev_expression
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049001:EVN_enriched
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050231:male_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053771:up_at_3h-NaCl
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055137:S.maltophilia_downregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:CEP
WBPaper00061340:IL2
WBPaper00061340:OLQ_parent
WBPaper00061340:SIA
WBPaper00061340:SMB
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:ckr-1-T09B9.3
WBPaper00061651:CEP_enriched
WBPaper00061651:IL2_DV_enriched
WBPaper00061651:URY_enriched
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:25_0
WBPaper00065841:25_1
WBPaper00065841:36_0
WBPaper00065841:36_2
WBPaper00065841:36_3
WBPaper00065841:65_0
WBPaper00065841:72_0
WBPaper00065841:94_0
WBPaper00065841:100_0
WBPaper00065841:108_0
WBPaper00065841:132_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_9
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
Map_infoPositivePositive_cloneT08G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI3.31535
ReferenceWBPaper00010526
WBPaper00018512
WBPaper00038491
WBPaper00055090
MethodGene