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WormBase Tree Display for Gene: WBGene00011227

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Name Class

WBGene00011227SMapS_parentSequenceR11
IdentityVersion2
NameCGC_namenlp-67Paper_evidenceWBPaper00053338
Sequence_nameR11.2
Molecular_nameR11.2
R11.2.1
CE03264
Other_nameCELE_R11.2Accession_evidenceNDBBX284606
Public_namenlp-67
DB_infoDatabaseAceViewgeneXQ799
WormQTLgeneWBGene00011227
WormFluxgeneWBGene00011227
NDBlocus_tagCELE_R11.2
NCBIgene187790
RefSeqproteinNM_001392906.1
TREEFAMTREEFAM_IDTF318872
TrEMBLUniProtAccO62346
UniProt_GCRPUniProtAccO62346
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
213 Nov 2017 15:54:28WBPerson1983Name_changeCGC_namenlp-67
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlp
Allele (36)
StrainWBStrain00031058
RNASeq_FPKM (74)
GO_annotation00037743
Ortholog (23)
Structured_descriptionAutomated_descriptionPredicted to be involved in neuropeptide signaling pathway.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR11.2
Corresponding_transcriptR11.2.1
Other_sequence (11)
Associated_feature (13)
Experimental_infoRNAi_resultWBRNAi00017734Inferred_automaticallyRNAi_primary
WBRNAi00034840Inferred_automaticallyRNAi_primary
WBRNAi00051746Inferred_automaticallyRNAi_primary
Expr_patternExpr1013234
Expr1034927
Expr1155411
Expr2005570
Expr2023788
Drives_constructWBCnstr00030828
Construct_productWBCnstr00030828
Microarray_resultsSMD_R11.2
177161_at
A_12_P111950
Aff_R11.2
GPL13394_WBGene00011227
GPL13914_R11.2
GPL14144_R11.2_108-167_0.937_2_A
GPL14144_R11.2_213-272_0.887_5_B
GPL14144_R11.2_39-98_0.965_1_C
GPL19516_CGZ0031830
GPL21109_R11.2
GPL3518_CE03264
GPL8304_CE_WBGene00011227_A
GPL8304_CE_WBGene00011227_B
GPL8673_R11_2P00042
GPL8673_R11_2P00094
GPL8673_R11_2P00155
GPL9450_R11.2
cea2.i.56563
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00041071:spe-44_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045316:prg-1_upregulated_L2
WBPaper00046024:sleep_upregulated_oscillating
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050193:cec-4(ok3124)_upregulated_L1
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:male-CEM-neurons_expressed
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056617:adr-1_downregulated_L4_transcript
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00058969:RIS_enriched
WBPaper00059117:B.subtilis_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061340:ALA
WBPaper00061340:ASE
WBPaper00061340:AVJ
WBPaper00061340:Neuroblast_M2_M3
WBPaper00061340:PLM
WBPaper00061340:PVT
WBPaper00061340:Rectal_cell
WBPaper00061340:RIM
WBPaper00061340:RIS
WBPaper00061357:mett-10(ok2204)_downregulated_OP50
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:K04C2.5-ZK1307.2
WBPaper00061651:ALA_enriched
WBPaper00061651:I6_enriched
WBPaper00061651:MI_enriched
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064505:tamoxifen_downregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065258:anchor-cell_enriched
WBPaper00065623:130
WBPaper00065623:139
WBPaper00065841:59_0
WBPaper00065841:60_0
WBPaper00065841:66_0
WBPaper00065841:73_0
WBPaper00065841:76_0
WBPaper00065841:85_0
WBPaper00065841:109_0
WBPaper00065841:135_0
WBPaper00065841:138_0
WBPaper00065841:139_0
WBPaper00065841:144_0
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066004:tdp-1(csb38)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_14
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Enterococcus_faecalis_downregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00032948:FedUp
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_G
WBPaper00038172:tax-6null_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
InteractionWBInteraction000504171
Map_infoPositivePositive_cloneR11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX23.6947
ReferenceWBPaper00064634
MethodGene