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WormBase Tree Display for Gene: WBGene00001836

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Name Class

WBGene00001836SMapS_parentSequenceCHROMOSOME_I
IdentityVersion1
NameCGC_namehda-3Person_evidenceWBPerson419
Sequence_nameR06C1.1
Molecular_nameR06C1.1
R06C1.1.1
CE18116
Other_nameCELE_R06C1.1Accession_evidenceNDBBX284601
Public_namehda-3
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Disease_infoPotential_model (16)
Molecular_infoCorresponding_CDSR06C1.1
Corresponding_transcriptR06C1.1.1
Other_sequence (34)
Associated_featureWBsf665010
WBsf665011
WBsf985414
WBsf985415
WBsf1010807
WBsf220380
Experimental_infoRNAi_result (15)
Expr_patternExpr12427
Expr15082
Expr1028648
Expr1031081
Expr1155067
Expr2012386
Expr2030622
Drives_constructWBCnstr00041993
Construct_productWBCnstr00041993
Regulate_expr_clusterWBPaper00066085:hda-3(ok1991)_downregulated
WBPaper00066085:hda-3(ok1991)_upregulated
AntibodyWBAntibody00000446
WBAntibody00002653
Microarray_resultsSMD_R06C1.1
173001_s_at
191191_s_at
A_12_P106237
Aff_R06C1.1
GPL13394_WBGene00001836
GPL13914_R06C1.1
GPL14144_R06C1.1_1037-1096_0.937_3_B
GPL14144_R06C1.1_1149-1208_0.945_1_A
GPL14144_R06C1.1_739-798_0.917_16_C
GPL19516_CGZ0031136
GPL19516_CGZ0031137
GPL21109_R06C1.1.1
GPL3518_CE18116
GPL8304_CE_WBGene00001836_A
GPL8304_CE_WBGene00001836_C
GPL8673_R06C1_1P00379
GPL8673_R06C1_1P00781
GPL8673_R06C1_1P01305
GPL9450_R06C1.1
cea2.p.15356
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032031:DConiospora_upregulated_cDNA_24h
WBPaper00033070:Elbe_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00052987:UV_upregulated_xpc-1;csb-1
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056826:SGP_biased
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
WBPaper00057162:meg-3_meg-4_upregulated_sRNA
WBPaper00058691:WDR-5.1_interacting_protein
WBPaper00058969:RIS_enriched
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059763:neuron_expressed
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:cyy-1_3136-hcf-1_2478
WBPaper00061527:trcs-2_5724-R11A8.7_17645
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064163:ZNFX-1_interacting_embryo
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065373:sek-1(km4)_upregulated_Ref
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00025032:cluster_130
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_N2
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037147:heatshock_upregulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_0.2mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-exposed_3h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(53_min)
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
[cgc6390]:intrinsic
Interaction (66)
Map_infoMapIPosition13.0041Error0.008284
PositivePositive_cloneR06C1Person_evidenceWBPerson419
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4416
Pseudo_map_position
Reference (25)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene