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WormBase Tree Display for Gene: WBGene00017159

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Name Class

WBGene00017159SMapS_parentSequenceF01F1
IdentityVersion1
Name (4)
DB_infoDatabaseAceViewgene3G969
WormQTLgeneWBGene00017159
WormFluxgeneWBGene00017159
NDBlocus_tagCELE_F01F1.2
PanthergeneCAEEL|WormBase=WBGene00017159|UniProtKB=Q19093
familyPTHR22977
NCBIgene175828
RefSeqproteinNM_065872.7
TREEFAMTREEFAM_IDTF314632
TrEMBLUniProtAccQ19093
UniProt_GCRPUniProtAccQ19093
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (12)
RNASeq_FPKM (74)
GO_annotation00063444
00063445
00063446
Contained_in_operonCEOP3348
Ortholog (31)
ParalogWBGene00016452Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be located in mitochondrion. Expressed in body wall musculature; intestine; and pharyngeal muscle cell. Is an ortholog of human CMC1 (C-X9-C motif containing 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF01F1.2
Corresponding_transcriptF01F1.2.1
Other_sequence (36)
Associated_featureWBsf645220
WBsf225014
WBsf225015
WBsf225016
Experimental_infoRNAi_result (15)
Expr_patternExpr101
Expr1027641
Expr1037374
Expr1147732
Expr2002196
Expr2020417
Drives_constructWBCnstr00027523
Construct_productWBCnstr00027523
Microarray_results (19)
Expression_clusterWBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00048988:daf-16(mu86)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049290:rsks-1(sv31)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:cyn-10_19153-K12H4.2
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064716:paraquat_upregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_5
WBPaper00025032:cluster_1
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00027342:alpha-Synuclein(WT)_upregulated
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00036286:Pattern_H
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_1
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MDE
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_ME
[cgc6390]:oogenesis-enriched
InteractionWBInteraction000008027
WBInteraction000008028
WBInteraction000175867
WBInteraction000193061
WBInteraction000193825
WBInteraction000205481
WBInteraction000241898
WBInteraction000246907
WBInteraction000247245
WBInteraction000248488
WBInteraction000256994
WBInteraction000267943
WBInteraction000280210
WBInteraction000297081
WBInteraction000305931
WBInteraction000314390
WBInteraction000316840
WBInteraction000325683
WBInteraction000334692
WBInteraction000346050
WBInteraction000355110
WBInteraction000358158
WBInteraction000369447
WBInteraction000382855
WBInteraction000393520
WBInteraction000395348
WBInteraction000405748
WBInteraction000407356
WBInteraction000427709
WBInteraction000451400
WBInteraction000458195
WBInteraction000458695
WBInteraction000461203
Map_infoPositivePositive_cloneF01F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.43728
ReferenceWBPaper00038491
WBPaper00055090
MethodGene