WormBase Tree Display for Gene: WBGene00011997

WBGene00011997 SMap: S_parent: Sequence: T24F1
  Identity: Version: 2
    Name: CGC_name: nlp-51 Person_evidence: WBPerson3480
      Sequence_name: T24F1.5
      Molecular_name: T24F1.5
        T24F1.5.1
        CE02365
      Other_name: CELE_T24F1.5 Accession_evidence: NDB BX284602
      Public_name: nlp-51
    DB_info: Database: AceView gene 2L608
        WormQTL gene WBGene00011997
        WormFlux gene WBGene00011997
        NDB locus_tag CELE_T24F1.5
        NCBI gene 174729
        RefSeq protein NM_064018.7
        TrEMBL UniProtAcc Q22746
        UniProt_GCRP UniProtAcc Q22746
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Oct 2016 14:40:56 WBPerson2970 Name_change: CGC_name: nlp-51
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nlp
    Allele: WBVar02157673
      WBVar01499702
      WBVar01498435
      WBVar01244697
      WBVar00269032
      WBVar00768289
      WBVar00768290
      WBVar00768291
      WBVar01498941
      WBVar01311738
    Strain: WBStrain00055122
      WBStrain00055213
      WBStrain00055071
    RNASeq_FPKM (74)
    GO_annotation: 00076278
    Ortholog: WBGene00025886 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053545 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00193200 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CSP21.g13604 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP38.g9988 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      FL83_14207 Caenorhabditis latens From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in neuropeptide signaling pathway. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T24F1.5
    Corresponding_transcript: T24F1.5.1
    Other_sequence (14)
    Associated_feature: WBsf666135
      WBsf223918
  Experimental_info: RNAi_result: WBRNAi00019171 Inferred_automatically: RNAi_primary
      WBRNAi00035934 Inferred_automatically: RNAi_primary
      WBRNAi00054076 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015855
      Expr1157620
      Expr2014315
      Expr2032556
    Drives_construct: WBCnstr00030213
    Construct_product: WBCnstr00030213
    Microarray_results (18)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:all-neurons_larva_SelectivelyEnriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045316:prg-1_upregulated_L2
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048988:neuron_expressed
      WBPaper00049001:EVN_enriched
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051265:F4_hrde-1(tm1200)_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056586:kri-1(ok1251)_upregulated
      WBPaper00057006:DietaryRestriction_upregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:wdr-5(ok1417)_downregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059605:mut-16(pk710)_downregulated
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_adult
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060634:fhod-1(tm2363)_upregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061340:AIM
      WBPaper00061340:ant_arc_V
      WBPaper00061340:OLQ
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:flp-5-F17C11.2
      WBPaper00061651:AIM_enriched
      WBPaper00061651:PVN_enriched
      WBPaper00061651:RIP_enriched
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062440:crh-1(syb385)_downregulated
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065623:140
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065841:92_0
      WBPaper00065841:119_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_1_6
      cgc4489_group_12
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00028789:PA14_vs_gacA_upregulated_4hr
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Serratia_marcesens_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00034661:AgNPs_downregulated
      WBPaper00036464:S.aureus-RN6390_regulated
      WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
      WBPaper00038060:SUMO-1_downregulated
      WBPaper00040963:Q100_down
      WBPaper00041002:HQ_3d_0.2mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041211:RPW-24_Up
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041960:daf-16_fasting_upregulated
      WBPaper00041960:kgb-1_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated_9hto12h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00050538:Fasting_upregulated
      WBPaper00050538:Fasting_upregulated_cholesterol-dependent
      [cgc5976]:class_1
    Interaction: WBInteraction000138732
      WBInteraction000152818
      WBInteraction000187784
      WBInteraction000188088
      WBInteraction000188316
      WBInteraction000188460
      WBInteraction000194279
      WBInteraction000195645
      WBInteraction000198123
      WBInteraction000208302
      WBInteraction000211298
      WBInteraction000218308
      WBInteraction000226858
      WBInteraction000239146
      WBInteraction000240372
      WBInteraction000244789
      WBInteraction000246908
      WBInteraction000254559
      WBInteraction000256015
      WBInteraction000261503
      WBInteraction000270133
      WBInteraction000272781
      WBInteraction000280067
      WBInteraction000280456
      WBInteraction000282286
      WBInteraction000289838
      WBInteraction000293282
      WBInteraction000295430
      WBInteraction000295708
      WBInteraction000297060
      WBInteraction000303490
      WBInteraction000328072
      WBInteraction000328764
      WBInteraction000331422
      WBInteraction000334395
      WBInteraction000337807
      WBInteraction000344770
      WBInteraction000352275
      WBInteraction000353538
      WBInteraction000372195
      WBInteraction000376573
      WBInteraction000379918
      WBInteraction000382479
      WBInteraction000390607
      WBInteraction000402725
      WBInteraction000403058
      WBInteraction000405784
      WBInteraction000408144
      WBInteraction000412027
      WBInteraction000416135
      WBInteraction000421681
      WBInteraction000424615
      WBInteraction000426619
      WBInteraction000431545
      WBInteraction000435070
      WBInteraction000437279
      WBInteraction000441611
      WBInteraction000444390
      WBInteraction000448385
      WBInteraction000450559
      WBInteraction000456489
      WBInteraction000461154
  Map_info: Map: II Position: 3.41742
    Positive: Positive_clone: T24F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene