WormBase Tree Display for Variation: WBVar01311738
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WBVar01311738 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01311738 | |||||
Other_name | cewivar00485808 | ||||||
CE02365:p.Ile5= | |||||||
T24F1.5.1:c.15C>T | |||||||
HGVSg | CHROMOSOME_II:g.11319663G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T24F1 | |||
Flanking_sequences | TCACTTGATGGGTAGGCCTGGGTGATGGCGAAGAGCACGAGGAGAGCCAA | ATGAGGAATCGCATTTTGATTTGAAACTGAAGAAAAACACAGGTTCAGTT | |||||
Mapping_target | T24F1 | ||||||
Type_of_mutation | Substitution | g | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539168844 | |||
Status | Live | ||||||
Affects | Gene | WBGene00011997 | |||||
Transcript | T24F1.5.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | T24F1.5.1:c.15C>T | ||||||
HGVSp | CE02365:p.Ile5= | ||||||
cDNA_position | 29 | ||||||
CDS_position | 15 | ||||||
Protein_position | 5 | ||||||
Exon_number | 2/4 | ||||||
Codon_change | atC/atT | ||||||
Amino_acid_change | I | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |