WormBase Tree Display for Gene: WBGene00000445

WBGene00000445 SMap: S_parent: Sequence: F29F11
  Identity: Version: 2
    Name: CGC_name: ceh-22 Person_evidence: WBPerson83
      Sequence_name: F29F11.5
      Molecular_name (15)
      Other_name: sys-3 Paper_evidence: WBPaper00027082
          Person_evidence: WBPerson320
        CELE_F29F11.5 Accession_evidence: NDB BX284605
      Public_name: ceh-22
    DB_info: Database: WormQTL gene WBGene00000445
        SignaLink protein WBGene00000445
        WormFlux gene WBGene00000445
        NDB locus_tag CELE_F29F11.5
        Panther gene CAEEL|WormBase=WBGene00000445|UniProtKB=P41936
          family PTHR24340
        NCBI gene 179485
        RefSeq protein NM_001083274.3
            NM_001356739.4
            NM_001083275.4
            NM_001083273.4
            NM_001356738.3
        SwissProt UniProtAcc P41936
        TrEMBL UniProtAcc A0A2C9C3N2
            A0A2C9C312
        UniProt_GCRP UniProtAcc P41936
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 04 Dec 2006 14:52:18 WBPerson1847 Event: Acquires_merge: WBGene00007040
              Name_change: Other_name: sys-3
      Acquires_merge: WBGene00007040
    Status: Live
  Gene_info (11)
  Disease_info: Experimental_model: DOID:162 Homo sapiens Paper_evidence: WBPaper00060633
          Curator_confirmed: WBPerson324
          Date_last_updated: 24 Jun 2021 00:00:00
  Models_disease_asserted: WBDOannot00000949
    WBDOannot00000954
    WBDOannot00000961
    WBDOannot00000962
  Molecular_info: Corresponding_CDS: F29F11.5a
      F29F11.5b
      F29F11.5c
      F29F11.5d
      F29F11.5e
    Corresponding_transcript: F29F11.5a.1
      F29F11.5b.1
      F29F11.5c.1
      F29F11.5d.1
      F29F11.5e.1
    Other_sequence: Acan_isotig04736
      Oden_isotig21208
      CBC02288_1
      MI05158
      MIC04433_1
      JI177847.1
    Associated_feature (24)
    Gene_product_binds (135)
    Transcription_factor: WBTranscriptionFactor000061
  Experimental_info: RNAi_result: WBRNAi00071562 Inferred_automatically: RNAi_primary
      WBRNAi00014111 Inferred_automatically: RNAi_primary
      WBRNAi00031582 Inferred_automatically: RNAi_primary
      WBRNAi00115657 Inferred_automatically: RNAi_primary
      WBRNAi00027310 Inferred_automatically: RNAi_primary
      WBRNAi00069884 Inferred_automatically: RNAi_primary
      WBRNAi00025316 Inferred_automatically: RNAi_primary
      WBRNAi00045934 Inferred_automatically: RNAi_primary
    Expr_pattern (23)
    Drives_construct (18)
    Construct_product (13)
    Antibody: WBAntibody00000082
      WBAntibody00000083
    Microarray_results (30)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00041222:unc-120(st364)_downregulated
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(gk119)_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00046741:Garlic-Extract_upregulated_mRNA
      WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
      WBPaper00048690:male-Z1-Z4-daughter_enriched
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00051352:Long-Term-Association-Memory_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061340:pm1_pm2
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:pm7
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:ceh-22_3981-inx-6
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:24_0
      WBPaper00065841:24_1
      WBPaper00065841:57_0
      WBPaper00065841:68_0
      WBPaper00065841:68_1
      WBPaper00065841:120_0
      WBPaper00065841:130_0
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_6_5
      cgc4489_group_2
      WBPaper00025032:cluster_18
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00036123:Cadmium_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction: WBInteraction000000537
      WBInteraction000002369
      WBInteraction000002374
      WBInteraction000003154
      WBInteraction000003178
      WBInteraction000003860
      WBInteraction000005789
      WBInteraction000028384
      WBInteraction000028570
      WBInteraction000030084
      WBInteraction000034756
      WBInteraction000035997
      WBInteraction000037348
      WBInteraction000037588
      WBInteraction000038310
      WBInteraction000038311
      WBInteraction000038312
      WBInteraction000038646
      WBInteraction000038647
      WBInteraction000038648
      WBInteraction000039925
      WBInteraction000041817
      WBInteraction000042735
      WBInteraction000043414
      WBInteraction000043491
      WBInteraction000043713
      WBInteraction000044820
      WBInteraction000045927
      WBInteraction000046128
      WBInteraction000046553
      WBInteraction000047719
      WBInteraction000049078
      WBInteraction000049737
      WBInteraction000052005
      WBInteraction000052006
      WBInteraction000052007
      WBInteraction000052008
      WBInteraction000052009
      WBInteraction000126090
      WBInteraction000126396
      WBInteraction000126594
      WBInteraction000161822
      WBInteraction000161823
      WBInteraction000165546
      WBInteraction000169427
      WBInteraction000173926
      WBInteraction000229579
      WBInteraction000229695
      WBInteraction000239608
      WBInteraction000263399
      WBInteraction000264788
      WBInteraction000274567
      WBInteraction000291489
      WBInteraction000315668
      WBInteraction000329333
      WBInteraction000329508
      WBInteraction000340426
      WBInteraction000349683
      WBInteraction000351765
      WBInteraction000354743
      WBInteraction000364703
      WBInteraction000366401
      WBInteraction000372050
      WBInteraction000378654
      WBInteraction000385972
      WBInteraction000387597
      WBInteraction000388951
      WBInteraction000396096
      WBInteraction000413329
      WBInteraction000414335
      WBInteraction000417703
      WBInteraction000427625
      WBInteraction000436303
      WBInteraction000441752
      WBInteraction000501543
      WBInteraction000501567
      WBInteraction000502315
      WBInteraction000502316
      WBInteraction000502645
      WBInteraction000502821
      WBInteraction000502822
      WBInteraction000503977
      WBInteraction000520433
      WBInteraction000520954
      WBInteraction000521670
      WBInteraction000521702
      WBInteraction000521703
      WBInteraction000521704
      WBInteraction000521705
      WBInteraction000521706
      WBInteraction000521736
      WBInteraction000521737
      WBInteraction000521738
      WBInteraction000524106
      WBInteraction000525588
      WBInteraction000525589
      WBInteraction000525590
      WBInteraction000525591
      WBInteraction000525592
      WBInteraction000525593
      WBInteraction000525594
      WBInteraction000525595
      WBInteraction000528918
      WBInteraction000529591
      WBInteraction000534642
      WBInteraction000534711
      WBInteraction000538592
      WBInteraction000538596
      WBInteraction000538601
      WBInteraction000538606
      WBInteraction000541817
    WBProcess: WBbiopr:00000073
      WBbiopr:00000114
  Map_info: Map: V Position: 2.70908 Error: 0.00321
    Well_ordered
    Positive: Positive_clone: F29F11 Inferred_automatically: From sequence, transcript, pseudogene data
        Y24E3
        Y33F10
        Y59H10
        Y61D5
    Mapping_data: Multi_point: 3789
      Pos_neg_data: 8351
        8352
        8353
        8354
        8355
  Reference (88)
  Method: Gene