WormBase Tree Display for Gene: WBGene00004921

WBGene00004921 SMap: S_parent: Sequence: F31E8
  Identity: Version: 1
    Name: CGC_name: snt-1 Person_evidence: WBPerson508
      Sequence_name: F31E8.2
      Molecular_name: F31E8.2a
        F31E8.2a.1
        CE02711
        F31E8.2b
        CE28229
        F31E8.2b.1
      Other_name: ric-2
        unc-121
        syt1 Accession_evidence: EMBL AJ303369
        syt-1
        CELE_F31E8.2 Accession_evidence: NDB BX284602
      Public_name: snt-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model: DOID:0110659 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11510)
      DOID:3635 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11510)
  Molecular_info: Corresponding_CDS: F31E8.2a
      F31E8.2b
    Corresponding_transcript: F31E8.2a.1
      F31E8.2b.1
    Other_sequence (64)
    Associated_feature (15)
  Experimental_info: RNAi_result: WBRNAi00089992 Inferred_automatically: RNAi_primary
      WBRNAi00046026 Inferred_automatically: RNAi_primary
      WBRNAi00090310 Inferred_automatically: RNAi_primary
      WBRNAi00092941 Inferred_automatically: RNAi_primary
      WBRNAi00112395 Inferred_automatically: RNAi_primary
      WBRNAi00027612 Inferred_automatically: RNAi_primary
      WBRNAi00076365 Inferred_automatically: RNAi_primary
      WBRNAi00022346 Inferred_automatically: RNAi_primary
      WBRNAi00089812 Inferred_automatically: RNAi_primary
      WBRNAi00090151 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram2081
      Expr334
      Expr8299
      Expr8300
      Expr11534
      Expr15234
      Expr1026155
      Expr1032450
      Expr1149922
      Expr2015976
      Expr2034211
    Drives_construct: WBCnstr00003269
      WBCnstr00005350
      WBCnstr00005351
      WBCnstr00009600
      WBCnstr00009601
      WBCnstr00017690
      WBCnstr00035321
      WBCnstr00038765
      WBCnstr00038766
    Construct_product: WBCnstr00001653
      WBCnstr00005350
      WBCnstr00005351
      WBCnstr00017690
      WBCnstr00019062
      WBCnstr00021442
      WBCnstr00035321
      WBCnstr00038765
      WBCnstr00038766
    Antibody: WBAntibody00000070
      WBAntibody00000152
      WBAntibody00000347
      WBAntibody00000730
      WBAntibody00000906
      WBAntibody00001655
    Microarray_results (31)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037682:sma-2_sma-4_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_embryo_enriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_CoreEnriched
      WBPaper00037950:dopaminergic-neurons_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_embryo_enriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049001:EVN_enriched
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050231:male_enriched
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:male-vas-deferens_expressed
      WBPaper00055969:electromagnetic-field_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ADF
      WBPaper00061340:AIB
      WBPaper00061340:AIY
      WBPaper00061340:AIZ
      WBPaper00061340:ALA
      WBPaper00061340:ASH
      WBPaper00061340:AUA
      WBPaper00061340:AVB
      WBPaper00061340:AVH
      WBPaper00061340:AVL
      WBPaper00061340:BAG
      WBPaper00061340:DA_DB
      WBPaper00061340:DD
      WBPaper00061340:IL1
      WBPaper00061340:RIA
      WBPaper00061340:RIM
      WBPaper00061340:SMD
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:kin-29_2839-unc-9_3883
      WBPaper00061527:unc-13_19769-unc-13_278
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:AS_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:DVB_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:M5_enriched
      WBPaper00061651:MC_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061651:PVC_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB_enriched
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065158:AFD_enriched
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:68_1
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4489_group_18
      cgc4489_male_enriched_neuronal_genes
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025032:cluster_155
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_A_Class
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Enterococcus_faecalis_downregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp2
      WBPaper00034661:AgNPs_downregulated
      WBPaper00034739:N2moreDR1350
      WBPaper00035227:heat_shock_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-exposed_3h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00042548:miRISC_enriched
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc6390]:Cluster_A
    Interaction: WBInteraction000004556
      WBInteraction000008825
      WBInteraction000033425
      WBInteraction000034503
      WBInteraction000034738
      WBInteraction000036280
      WBInteraction000038235
      WBInteraction000038609
      WBInteraction000038787
      WBInteraction000038941
      WBInteraction000040920
      WBInteraction000042744
      WBInteraction000044198
      WBInteraction000045360
      WBInteraction000045418
      WBInteraction000046051
      WBInteraction000050220
      WBInteraction000122621
      WBInteraction000122888
      WBInteraction000122889
      WBInteraction000122890
      WBInteraction000122891
      WBInteraction000122892
      WBInteraction000140901
      WBInteraction000145308
      WBInteraction000150960
      WBInteraction000157367
      WBInteraction000158881
      WBInteraction000166831
      WBInteraction000166940
      WBInteraction000167551
      WBInteraction000167552
      WBInteraction000167553
      WBInteraction000167716
      WBInteraction000169798
      WBInteraction000170049
      WBInteraction000173417
      WBInteraction000173809
      WBInteraction000173810
      WBInteraction000173811
      WBInteraction000179611
      WBInteraction000204742
      WBInteraction000222781
      WBInteraction000224389
      WBInteraction000255744
      WBInteraction000262792
      WBInteraction000348772
      WBInteraction000364443
      WBInteraction000459419
      WBInteraction000500593
      WBInteraction000500594
      WBInteraction000500595
      WBInteraction000500609
      WBInteraction000500610
      WBInteraction000500611
      WBInteraction000500615
      WBInteraction000500616
      WBInteraction000500617
      WBInteraction000503808
      WBInteraction000503957
      WBInteraction000518832
      WBInteraction000520026
      WBInteraction000525112
      WBInteraction000525113
      WBInteraction000540913
      WBInteraction000541505
      WBInteraction000555715
      WBInteraction000555721
      WBInteraction000555801
      WBInteraction000555802
      WBInteraction000556952
      WBInteraction000556953
      WBInteraction000556954
      WBInteraction000558092
      WBInteraction000558093
      WBInteraction000558094
      WBInteraction000563100
  Map_info: Map: II Position: 0.115793 Error: 0.000262
    Well_ordered
    Positive: Positive_clone: F31E8 Inferred_automatically: From sequence, transcript, pseudogene data
        F58D4
        K10B7
    Mapping_data: 2_point: 6025
        6167
      Multi_point: 2072
        2073
        2422
        2423
        2424
      Pos_neg_data (18)
  Reference (115)
  Remark: [Rand JB] structural gene for synaptotagmin (cosmid hybridization by Nonet M). Null alleles viable. 14 additional md alleles exist.
  Method: Gene