WormBase Tree Display for Gene: WBGene00014109
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WBGene00014109 | SMap | S_parent | Sequence | ZK856 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | chpf-1 | Person_evidence | WBPerson2233 | |||||
Sequence_name | ZK856.8 | ||||||||
Molecular_name | ZK856.8 | ||||||||
ZK856.8.1 | |||||||||
CE06665 | |||||||||
Other_name | CELE_ZK856.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | chpf-1 | ||||||||
DB_info | Database | AceView | gene | 5K682 | |||||
WormQTL | gene | WBGene00014109 | |||||||
WormFlux | gene | WBGene00014109 | |||||||
NDB | locus_tag | CELE_ZK856.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00014109|UniProtKB=Q23643 | |||||||
family | PTHR46002 | ||||||||
NCBI | gene | 179415 | |||||||
RefSeq | protein | NM_001392590.1 | |||||||
TREEFAM | TREEFAM_ID | TF354284 | |||||||
TrEMBL | UniProtAcc | Q23643 | |||||||
UniProt_GCRP | UniProtAcc | Q23643 | |||||||
OMIM | gene | 606988 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 14 Apr 2015 09:52:28 | WBPerson2970 | Name_change | CGC_name | chpf-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chpf | ||||||||
Allele (20) | |||||||||
Strain | WBStrain00003461 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Contained_in_operon | CEOP5248 | ||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00003941 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00019108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in head; intestine; tail; and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17433) | ||||
Molecular_info | Corresponding_CDS | ZK856.8 | |||||||
Corresponding_transcript | ZK856.8.1 | ||||||||
Other_sequence (109) | |||||||||
Associated_feature | WBsf652968 | ||||||||
WBsf652969 | |||||||||
WBsf234342 | |||||||||
WBsf234343 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Positive | Positive_clone | ZK856 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.32882 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Method | Gene |