WormBase Tree Display for Gene: WBGene00014109
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| WBGene00014109 | SMap | S_parent | Sequence | ZK856 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | chpf-1 | Person_evidence | WBPerson2233 | |||||
| Sequence_name | ZK856.8 | ||||||||
| Molecular_name | ZK856.8 | ||||||||
| ZK856.8.1 | |||||||||
| CE06665 | |||||||||
| Other_name | CELE_ZK856.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | chpf-1 | ||||||||
| DB_info | Database | AceView | gene | 5K682 | |||||
| WormQTL | gene | WBGene00014109 | |||||||
| WormFlux | gene | WBGene00014109 | |||||||
| NDB | locus_tag | CELE_ZK856.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00014109|UniProtKB=Q23643 | |||||||
| family | PTHR46002 | ||||||||
| NCBI | gene | 179415 | |||||||
| RefSeq | protein | NM_001392590.1 | |||||||
| TREEFAM | TREEFAM_ID | TF354284 | |||||||
| TrEMBL | UniProtAcc | Q23643 | |||||||
| UniProt_GCRP | UniProtAcc | Q23643 | |||||||
| OMIM | gene | 606988 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 14 Apr 2015 09:52:28 | WBPerson2970 | Name_change | CGC_name | chpf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | chpf | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00003461 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5248 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00003941 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00019108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in head; intestine; tail; and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17433) | ||||
| Molecular_info | Corresponding_CDS | ZK856.8 | |||||||
| Corresponding_transcript | ZK856.8.1 | ||||||||
| Other_sequence (109) | |||||||||
| Associated_feature | WBsf652968 | ||||||||
| WBsf652969 | |||||||||
| WBsf234342 | |||||||||
| WBsf234343 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033583 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022203 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080519 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027568 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027110 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059779 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7265 | ||||||||
| Expr12596 | |||||||||
| Expr12597 | |||||||||
| Expr1012295 | |||||||||
| Expr1036319 | |||||||||
| Expr1163208 | |||||||||
| Expr2009997 | |||||||||
| Expr2028238 | |||||||||
| Drives_construct | WBCnstr00003922 | ||||||||
| WBCnstr00022362 | |||||||||
| WBCnstr00022363 | |||||||||
| WBCnstr00029301 | |||||||||
| Construct_product | WBCnstr00029301 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000117438 | ||||||||
| WBInteraction000117440 | |||||||||
| WBInteraction000148839 | |||||||||
| WBInteraction000172736 | |||||||||
| WBInteraction000180858 | |||||||||
| WBInteraction000184014 | |||||||||
| WBInteraction000190761 | |||||||||
| WBInteraction000217428 | |||||||||
| WBInteraction000225595 | |||||||||
| WBInteraction000256333 | |||||||||
| WBInteraction000259703 | |||||||||
| WBInteraction000269463 | |||||||||
| WBInteraction000280089 | |||||||||
| WBInteraction000285818 | |||||||||
| WBInteraction000304769 | |||||||||
| WBInteraction000308842 | |||||||||
| WBInteraction000310496 | |||||||||
| WBInteraction000346622 | |||||||||
| WBInteraction000380051 | |||||||||
| WBInteraction000407894 | |||||||||
| WBInteraction000415653 | |||||||||
| WBInteraction000420445 | |||||||||
| WBInteraction000421524 | |||||||||
| WBInteraction000428892 | |||||||||
| WBInteraction000452979 | |||||||||
| WBInteraction000524149 | |||||||||
| WBInteraction000524181 | |||||||||
| WBInteraction000559738 | |||||||||
| Map_info | Positive | Positive_clone | ZK856 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.32882 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
