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WormBase Tree Display for Gene: WBGene00006771

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Name Class

WBGene00006771SMapS_parentSequenceY71G12B
IdentityVersion3
NameCGC_nametln-1Person_evidenceWBPerson110
Sequence_nameY71G12B.11
Molecular_name (21)
Other_nameunc-35Person_evidenceWBPerson261
Ce TalinPaper_evidenceWBPaper00036199
CELE_Y71G12B.11Accession_evidenceNDBBX284601
Public_nametln-1
DB_infoDatabaseWormFluxgeneWBGene00006771
NDBlocus_tagCELE_Y71G12B.11
PanthergeneCAEEL|WormBase=WBGene00006771|UniProtKB=G5EGK1
familyPTHR19981
NCBIgene171736
RefSeqproteinNM_001262110.3
NM_001313547.3
NM_001373653.2
NM_001313545.3
NM_001392973.1
NM_058485.8
NM_001381251.1
TREEFAMTREEFAM_IDTF314677
TrEMBLUniProtAccG4S9F5
G5EGK1
Q95XN3
A0A0K3ATT6
A0A0K3AQU9
W6SBK6
A0A0K3AUD9
UniProt_GCRPUniProtAccG5EGK1
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:42WBPerson1971EventImportedInitial conversion from geneace
212 Aug 2011 14:19:05WBPerson2970Name_changeCGC_nametln-1
Other_nameunc-35
331 Jan 2013 09:04:22WBPerson2970EventAcquires_mergeWBGene00022151
Acquires_mergeWBGene00022151
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtln
Reference_alleleWBVar00143069
Allele (384)
Possibly_affected_byWBVar02158438
Legacy_informatione259 : loopy irregular forward movement poor backing; active; slightly thin. ES2. ME2. NA1.
[C.elegansII] e259 : loopy irregular forward movement, poor backing; active; slightly thin. ES2. ME2. NA1. [Brenner 1974]
StrainWBStrain00027032
WBStrain00032143
WBStrain00005542
WBStrain00006169
WBStrain00047172
RNASeq_FPKM (74)
GO_annotation (21)
Ortholog (49)
ParalogWBGene00006836
Structured_descriptionAutomated_descriptionPredicted to enable integrin binding activity. Involved in negative regulation of epidermal growth factor receptor signaling pathway; regulation of vulval development; and vulval cell fate specification. Located in basement membrane; contractile fiber; and lateral plasma membrane. Expressed in several structures, including Psub4; Z2; Z3; distal tip cell; and vulval cell. Is an ortholog of human TLN2 (talin 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY71G12B.11a
Y71G12B.11b
Y71G12B.11c
Y71G12B.11d
Y71G12B.11e
Y71G12B.11f
Y71G12B.11g
Corresponding_transcriptY71G12B.11a.1
Y71G12B.11b.1
Y71G12B.11c.1
Y71G12B.11d.1
Y71G12B.11e.1
Y71G12B.11f.1
Y71G12B.11g.1
Other_sequence (80)
Associated_featureWBsf643060
WBsf655945
WBsf655946
WBsf655947
WBsf655948
WBsf655949
WBsf655950
WBsf655951
WBsf655952
WBsf655953
WBsf655954
WBsf655955
WBsf655956
WBsf655957
WBsf655958
WBsf655959
WBsf655960
WBsf655961
WBsf655962
WBsf655963
WBsf655964
WBsf655965
WBsf655966
WBsf655967
WBsf655968
WBsf655969
WBsf655970
WBsf982744
WBsf982745
WBsf1009246
WBsf217241
WBsf217242
WBsf217243
Experimental_infoRNAi_resultWBRNAi00091674Inferred_automaticallyRNAi_primary
WBRNAi00022499Inferred_automaticallyRNAi_primary
WBRNAi00026944Inferred_automaticallyRNAi_primary
WBRNAi00026943Inferred_automaticallyRNAi_primary
WBRNAi00099837Inferred_automaticallyRNAi_primary
WBRNAi00080633Inferred_automaticallyRNAi_primary
WBRNAi00004819Inferred_automaticallyRNAi_primary
WBRNAi00094175Inferred_automaticallyRNAi_primary
WBRNAi00058197Inferred_automaticallyRNAi_primary
WBRNAi00101073Inferred_automaticallyRNAi_primary
WBRNAi00100886Inferred_automaticallyRNAi_primary
WBRNAi00026941Inferred_automaticallyRNAi_primary
WBRNAi00071109Inferred_automaticallyRNAi_primary
WBRNAi00026939Inferred_automaticallyRNAi_primary
WBRNAi00091770Inferred_automaticallyRNAi_primary
WBRNAi00108535Inferred_automaticallyRNAi_primary
WBRNAi00109626Inferred_automaticallyRNAi_primary
WBRNAi00091854Inferred_automaticallyRNAi_primary
WBRNAi00063785Inferred_automaticallyRNAi_primary
WBRNAi00065776Inferred_automaticallyRNAi_primary
WBRNAi00004818Inferred_automaticallyRNAi_primary
WBRNAi00100512Inferred_automaticallyRNAi_primary
WBRNAi00083948Inferred_automaticallyRNAi_primary
WBRNAi00075457Inferred_automaticallyRNAi_primary
WBRNAi00109432Inferred_automaticallyRNAi_primary
WBRNAi00114825Inferred_automaticallyRNAi_primary
WBRNAi00099433Inferred_automaticallyRNAi_primary
WBRNAi00065875Inferred_automaticallyRNAi_primary
WBRNAi00091734Inferred_automaticallyRNAi_primary
WBRNAi00085383Inferred_automaticallyRNAi_primary
WBRNAi00099635Inferred_automaticallyRNAi_primary
WBRNAi00071886Inferred_automaticallyRNAi_primary
WBRNAi00099231Inferred_automaticallyRNAi_primary
WBRNAi00109335Inferred_automaticallyRNAi_primary
WBRNAi00026940Inferred_automaticallyRNAi_primary
WBRNAi00091719Inferred_automaticallyRNAi_primary
WBRNAi00026942Inferred_automaticallyRNAi_primary
WBRNAi00091704Inferred_automaticallyRNAi_primary
WBRNAi00001775Inferred_automaticallyRNAi_primary
WBRNAi00100138Inferred_automaticallyRNAi_primary
WBRNAi00109238Inferred_automaticallyRNAi_primary
WBRNAi00117138Inferred_automaticallyRNAi_primary
WBRNAi00100325Inferred_automaticallyRNAi_primary
WBRNAi00083954Inferred_automaticallyRNAi_primary
WBRNAi00100699Inferred_automaticallyRNAi_primary
WBRNAi00109529Inferred_automaticallyRNAi_primary
WBRNAi00091689Inferred_automaticallyRNAi_primary
WBRNAi00091853Inferred_automaticallyRNAi_primary
WBRNAi00091749Inferred_automaticallyRNAi_primary
WBRNAi00116157Inferred_automaticallyRNAi_primary
Expr_patternExpr1325
Expr11786
Expr13258
Expr1022326
Expr1039757
Expr1161614
Expr2017418
Expr2035557
Drives_constructWBCnstr00042808
Microarray_results (50)
Expression_cluster (203)
Interaction (21)
Map_infoMapIPosition-13.1715
Well_ordered
PositivePositive_cloneY71G12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point3
258
7147
7168
Multi_point2
348
350
3659
3660
3932
5723
Pos_neg_data526
3764
6288
Reference (24)
MethodGene