WormBase Tree Display for CDS: Y71G12B.11a
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| Y71G12B.11a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y71G12B | ||
| Structure | Source_exons | 1 | 133 | ||
| 314 | 863 | ||||
| 3451 | 3842 | ||||
| 5070 | 5530 | ||||
| 6609 | 7222 | ||||
| 9221 | 9977 | ||||
| 11701 | 11774 | ||||
| 12851 | 16931 | ||||
| 17231 | 17614 | ||||
| 18461 | 18676 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EGK1 | |
| UniProt | UniProtAcc | G5EGK1 | |||
| UniProt_GCRP | UniProtAcc | G5EGK1 | |||
| AlphaFold | entry | G5EGK1 | |||
| NCBI_protein | GI_number | GI:373219428 | |||
| TREEFAM | TREEFAM_ID | TF314677 | |||
| Protein_id | CHROMOSOME_I | CCD67967 | 1 | ||
| DB_remark | TLN-1 protein; contains similarity to Pfam domains PF00373 (FERM central domain), PF01608 (I/LWEQ domain), PF08913 (Vinculin Binding Site), PF09141 (Talin, middle domain), PF16511 (N-terminal or F0 domain of Talin-head FERM), PF21692 (Talin, R4 domain); contains similarity to Interpro domains IPR002558 (I/LWEQ domain), IPR015224 (Talin, central), IPR036723 (Alpha-catenin/vinculin-like superfamily), IPR014352 (FERM/acyl-CoA-binding protein superfamily), IPR035964 (I/LWEQ domain superfamily), IPR032425 (Talin, N-terminal F0 domain), IPR015009 (Vinculin-binding site-containing domain), IPR019748 (FERM central domain), IPR011993 (PH-like domain superfamily), IPR035963 (FERM superfamily, second domain), IPR036476 (Talin, central domain superfamily), IPR019749 (Band 4.1 domain), IPR049108 (Talin, R4 domain) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | EMBL | C41896 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible (12) | |||||
| Associated_feature | WBsf020357 | ||||
| Method | curated |
