WormBase Tree Display for Gene: WBGene00010744

WBGene00010744 SMap: S_parent: Sequence: K10D6
  Identity: Version: 1
    Name: Sequence_name: K10D6.4
      Molecular_name: K10D6.4a
        K10D6.4a.1
        CE36185
        K10D6.4b
        CE45414
        K10D6.4b.1
      Other_name: CELE_K10D6.4 Accession_evidence: NDB BX284605
      Public_name: K10D6.4
    DB_info: Database: AceView gene 5L695
        WormQTL gene WBGene00010744
        WormFlux gene WBGene00010744
        NDB locus_tag CELE_K10D6.4
        NCBI gene 179549
        RefSeq protein NM_001269381.2
            NM_001269380.3
        TREEFAM TREEFAM_ID TF354025
        TrEMBL UniProtAcc Q21423
            E2JL00
        UniProt_GCRP UniProtAcc E2JL00
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (207)
    RNASeq_FPKM (74)
    Ortholog (26)
    Structured_description: Automated_description: Enriched in several structures, including ABalppppppp; ABpraaapppp; head mesodermal cell; neurons; and pm6 based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by eleven chemicals including levamisole; Zidovudine; and Psoralens based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00016981 Inferred_automatically: RNAi_primary
      WBRNAi00050544 Inferred_automatically: RNAi_primary
      WBRNAi00050543 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027423
      Expr1034704
      Expr1154249
      Expr2005039
      Expr2023258
    Drives_construct: WBCnstr00031178
    Construct_product: WBCnstr00031178
    Microarray_results (23)
    Expression_cluster: WBPaper00032425:up_in_zfp-1
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00037682:sma-2_sma-4_upregulated
      WBPaper00037946:EGL-5_interacting
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(gk119)_upregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00048971:daf-16(mgDf50)_upregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049098:heat-induced_hrde-1(tm1200)
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051257:Levamisole_upregulated
      WBPaper00051352:Long-Term-Association-Memory_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Psora_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061007:X.citri_upregulated
      WBPaper00061340:AMso_parent
      WBPaper00061340:ASG_AWA
      WBPaper00061340:Body_wall_muscle
      WBPaper00061340:I2_grandparent
      WBPaper00061340:Neuroblast_ASJ_AUA
      WBPaper00061340:OLQ_grandparent
      WBPaper00061340:Pharyngeal_neuron
      WBPaper00061340:pm6
      WBPaper00061340:PVR
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:cdc-42_17192-rab-5_18073
      WBPaper00061527:ldb-1_2877-scd-1_3086
      WBPaper00061651:ALN_enriched
      WBPaper00061651:ASG_enriched
      WBPaper00061651:AWC_OFF_enriched
      WBPaper00061651:AWC_ON_enriched
      WBPaper00061651:DA9_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:PDB_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064871:hypoxia_downregulated_F2
      WBPaper00065835:Day11_vs_Day1_upregulated
      WBPaper00065841:17_0
      WBPaper00065841:27_0
      WBPaper00065841:35_1
      WBPaper00065841:35_2
      WBPaper00065841:35_3
      WBPaper00065841:35_4
      WBPaper00065841:55_0
      WBPaper00065841:65_0
      WBPaper00065841:71_0
      WBPaper00065841:114_0
      WBPaper00065841:132_0
      WBPaper00065841:136_0
      WBPaper00065975:P-body_vs_oocyte_enriched
      cgc4386_cluster_5_1
      cgc4489_group_23
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00034739:N2moreDR1350
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00036286:Pattern_D
      WBPaper00036383:ash-2_Day8_regulated
      WBPaper00037695:CC_3-day
      WBPaper00038060:SUMO-1_downregulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038304:octr-1_regulated
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045015:nhr-25(RNAi)_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(53_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    SAGE_tag (12)
    Interaction: WBInteraction000217985
      WBInteraction000550787
      WBInteraction000519346
  Map_info: Positive: Positive_clone: K10D6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 2.9716
  Reference: WBPaper00026302
    WBPaper00062311
  Method: Gene