WormBase Tree Display for Gene: WBGene00020421
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| WBGene00020421 | SMap | S_parent | Sequence | T10E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | chtb-3 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | T10E10.4 | ||||||||
| Molecular_name | T10E10.4a | ||||||||
| T10E10.4a.1 | |||||||||
| CE53505 | |||||||||
| T10E10.4b | |||||||||
| CE54436 | |||||||||
| T10E10.4b.1 | |||||||||
| Other_name | T10E10.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T10E10.4 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | chtb-3 | ||||||||
| DB_info | Database | AceView | gene | XG934 | |||||
| WormQTL | gene | WBGene00020421 | |||||||
| WormFlux | gene | WBGene00020421 | |||||||
| NDB | locus_tag | CELE_T10E10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020421|UniProtKB=Q22378 | |||||||
| family | PTHR34150 | ||||||||
| NCBI | gene | 180906 | |||||||
| RefSeq | protein | NM_001404201.1 | |||||||
| NM_001375049.2 | |||||||||
| TrEMBL | UniProtAcc | Q22378 | |||||||
| A0A8S4QGS8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q22378 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | chtb-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | chtb | ||||||||
| Allele | WBVar00053922 | ||||||||
| WBVar01153419 | |||||||||
| WBVar01153420 | |||||||||
| WBVar00277240 | |||||||||
| WBVar01153421 | |||||||||
| WBVar01153422 | |||||||||
| WBVar01153423 | |||||||||
| WBVar01153424 | |||||||||
| WBVar01153425 | |||||||||
| WBVar01153426 | |||||||||
| WBVar01153427 | |||||||||
| WBVar01153428 | |||||||||
| WBVar01153429 | |||||||||
| WBVar01153430 | |||||||||
| WBVar01153431 | |||||||||
| WBVar01153432 | |||||||||
| WBVar01153433 | |||||||||
| WBVar01153434 | |||||||||
| WBVar01153435 | |||||||||
| WBVar01153436 | |||||||||
| WBVar01153437 | |||||||||
| WBVar01758628 | |||||||||
| WBVar01550205 | |||||||||
| WBVar01758629 | |||||||||
| WBVar01153438 | |||||||||
| WBVar01758630 | |||||||||
| WBVar01153439 | |||||||||
| WBVar01153440 | |||||||||
| WBVar01153441 | |||||||||
| WBVar01153442 | |||||||||
| WBVar01153443 | |||||||||
| WBVar01153444 | |||||||||
| WBVar01153445 | |||||||||
| WBVar01153446 | |||||||||
| WBVar01153447 | |||||||||
| WBVar01153448 | |||||||||
| WBVar01830653 | |||||||||
| WBVar01153449 | |||||||||
| WBVar01153450 | |||||||||
| WBVar01153451 | |||||||||
| WBVar01153452 | |||||||||
| WBVar01153453 | |||||||||
| WBVar01153454 | |||||||||
| WBVar01153455 | |||||||||
| WBVar01153456 | |||||||||
| WBVar01153457 | |||||||||
| WBVar01703379 | |||||||||
| WBVar02032731 | |||||||||
| WBVar01487077 | |||||||||
| WBVar01469306 | |||||||||
| WBVar02120884 | |||||||||
| WBVar02120885 | |||||||||
| WBVar00505872 | |||||||||
| WBVar00505873 | |||||||||
| WBVar00079756 | |||||||||
| WBVar00505874 | |||||||||
| WBVar00505875 | |||||||||
| WBVar00079757 | |||||||||
| WBVar00505876 | |||||||||
| WBVar00079758 | |||||||||
| WBVar00505877 | |||||||||
| WBVar00505878 | |||||||||
| WBVar00505879 | |||||||||
| WBVar00505880 | |||||||||
| WBVar00505881 | |||||||||
| WBVar00505882 | |||||||||
| WBVar00505883 | |||||||||
| WBVar00505884 | |||||||||
| WBVar02027184 | |||||||||
| WBVar00505885 | |||||||||
| WBVar00505886 | |||||||||
| WBVar01881209 | |||||||||
| WBVar01881210 | |||||||||
| WBVar01881211 | |||||||||
| WBVar01881212 | |||||||||
| WBVar01881213 | |||||||||
| WBVar01881214 | |||||||||
| WBVar02064247 | |||||||||
| WBVar02064248 | |||||||||
| WBVar02064249 | |||||||||
| WBVar02064250 | |||||||||
| WBVar02064251 | |||||||||
| WBVar01153414 | |||||||||
| WBVar01153415 | |||||||||
| WBVar01153416 | |||||||||
| WBVar01153417 | |||||||||
| WBVar01500067 | |||||||||
| WBVar01153418 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00125052 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00004156 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008073 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00010573 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019839 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044016 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021504 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00235273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | T10E10.4 encodes a large (966-residue) protein, predicted to besecreted, with two N-terminal chitin-binding peritrophin-A domainsfollowed by 14 cysteine-rich domains and one C-terminal EB module; thegeneral organization of T10E10.4 protein resembles that of K04H4.2;T10E10.4 has no obvious function in mass RNAi assays but, like CEJ-1 andCPG-2, might participate in chitin synthesis. | Paper_evidence | WBPaper00028588 | |||||
| WBPaper00029231 | |||||||||
| WBPaper00029232 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 09 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable chitin binding activity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10E10.4a | |||||||
| T10E10.4b | |||||||||
| Corresponding_CDS_history | T10E10.4:wp272 | ||||||||
| Corresponding_transcript | T10E10.4a.1 | ||||||||
| T10E10.4b.1 | |||||||||
| Other_sequence | JI166331.1 | ||||||||
| JI477601.1 | |||||||||
| JI170910.1 | |||||||||
| Associated_feature | WBsf654061 | ||||||||
| WBsf670618 | |||||||||
| WBsf670619 | |||||||||
| WBsf1005552 | |||||||||
| WBsf1005553 | |||||||||
| WBsf1023089 | |||||||||
| WBsf237470 | |||||||||
| Experimental_info (7) | |||||||||
| Map_info | Map | X | Position | -3.10406 | |||||
| Positive | Positive_clone | T10E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
