WormBase Tree Display for Gene: WBGene00019636
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| WBGene00019636 | SMap | S_parent | Sequence | K10F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gsto-3 | |||||||
| Sequence_name | K10F12.4 | ||||||||
| Molecular_name | K10F12.4a | ||||||||
| K10F12.4a.1 | |||||||||
| CE12092 | |||||||||
| K10F12.4b | |||||||||
| CE31038 | |||||||||
| K10F12.4b.1 | |||||||||
| Other_name | CELE_K10F12.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gsto-3 | ||||||||
| DB_info | Database | AceView | gene | 3A986 | |||||
| WormQTL | gene | WBGene00019636 | |||||||
| WormFlux | gene | WBGene00019636 | |||||||
| NDB | locus_tag | CELE_K10F12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019636|UniProtKB=O17234 | |||||||
| family | PTHR43968 | ||||||||
| NCBI | gene | 175196 | |||||||
| RefSeq | protein | NM_001393255.1 | |||||||
| NM_171061.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF105325 | |||||||
| TrEMBL | UniProtAcc | O17234 | |||||||
| Q8IA74 | |||||||||
| UniProt_GCRP | UniProtAcc | O17234 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Oct 2007 09:50:31 | WBPerson2970 | Name_change | CGC_name | gsto-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gsto | ||||||||
| Allele | WBVar01500082 | ||||||||
| WBVar01768446 | |||||||||
| WBVar01768447 | |||||||||
| WBVar01768448 | |||||||||
| WBVar01768449 | |||||||||
| WBVar01768450 | |||||||||
| WBVar01254550 | |||||||||
| WBVar01768451 | |||||||||
| WBVar01768452 | |||||||||
| WBVar01254552 | |||||||||
| WBVar01768453 | |||||||||
| WBVar02029932 | |||||||||
| WBVar02029933 | |||||||||
| WBVar02029934 | |||||||||
| WBVar02012589 | |||||||||
| WBVar01498832 | |||||||||
| WBVar01902966 | |||||||||
| WBVar01902967 | |||||||||
| WBVar01902968 | |||||||||
| WBVar01478984 | |||||||||
| WBVar02069384 | |||||||||
| WBVar01399767 | |||||||||
| WBVar01399778 | |||||||||
| WBVar01399789 | |||||||||
| WBVar01399800 | |||||||||
| WBVar01399811 | |||||||||
| WBVar00796654 | |||||||||
| WBVar00796655 | |||||||||
| WBVar00796656 | |||||||||
| WBVar00796657 | |||||||||
| WBVar00796658 | |||||||||
| WBVar00796659 | |||||||||
| WBVar00387748 | |||||||||
| WBVar00796660 | |||||||||
| WBVar00796661 | |||||||||
| WBVar00387749 | |||||||||
| WBVar00387750 | |||||||||
| WBVar00796662 | |||||||||
| WBVar01951061 | |||||||||
| WBVar00796663 | |||||||||
| WBVar00387751 | |||||||||
| WBVar00796664 | |||||||||
| WBVar00796665 | |||||||||
| WBVar00796666 | |||||||||
| WBVar00796667 | |||||||||
| WBVar01564051 | |||||||||
| WBVar00796668 | |||||||||
| WBVar00796669 | |||||||||
| WBVar00796670 | |||||||||
| WBVar00796671 | |||||||||
| WBVar00796672 | |||||||||
| WBVar00796673 | |||||||||
| WBVar00796674 | |||||||||
| WBVar00796675 | |||||||||
| WBVar00796676 | |||||||||
| WBVar00796677 | |||||||||
| WBVar00796678 | |||||||||
| WBVar00796679 | |||||||||
| WBVar00796680 | |||||||||
| WBVar00796681 | |||||||||
| WBVar01499668 | |||||||||
| WBVar01700343 | |||||||||
| WBVar00029903 | |||||||||
| WBVar02053006 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00001792 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015337 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016204 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00043097 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001365 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001371 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001790 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001791 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008920 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021817 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | K10F12.4 encodes, by alternative splicing, one isoform of a putative omega-class glutathione transferase (GST; EC 2.5.1.18) which, like its paralog GSTO-1, might have thiol oxidoreductase and dehydroascorbate reductase activity; other K10F12.4 paralogs include GST-44 and C02D5.3; K10F12.4 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00031042 | |||||
| WBPaper00031083 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 Oct 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable glutathione dehydrogenase (ascorbate) activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Alzheimer's disease; Parkinson's disease; and asthma. Is an ortholog of human GSTO1 (glutathione S-transferase omega 1) and GSTO2 (glutathione S-transferase omega 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13312,HGNC:23064) | ||||
| DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23064) | ||||||
| DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13312,HGNC:23064) | ||||||
| Molecular_info | Corresponding_CDS | K10F12.4a | |||||||
| K10F12.4b | |||||||||
| Corresponding_transcript | K10F12.4a.1 | ||||||||
| K10F12.4b.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature (2) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050549 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006697 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016984 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034265 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028100 | ||||||||
| Expr1038480 | |||||||||
| Expr1154252 | |||||||||
| Expr2012338 | |||||||||
| Expr2030575 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | III | Position | -26.8824 | Error | 0.003615 | |||
| Positive | Positive_clone | K10F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
