WormBase Tree Display for Gene: WBGene00010700

WBGene00010700 SMap: S_parent: Sequence: K09A9
  Identity: Version: 2
    Name: CGC_name: nipi-3 Person_evidence: WBPerson168
      Sequence_name: K09A9.1
      Molecular_name: K09A9.1
        K09A9.1.1
        CE42581
      Other_name: CELE_K09A9.1 Accession_evidence: NDB BX284606
      Public_name: nipi-3
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Apr 2008 15:10:27 WBPerson2970 Name_change: CGC_name: nipi-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nipi
    Allele: WBVar02147576
      WBVar02147575
      WBVar01499519
      WBVar01499710
      WBVar02140735
      WBVar00086653
      WBVar01500132
      WBVar01901861
      WBVar01528587
      WBVar01901862
      WBVar01528588
      WBVar01553582
      WBVar01826071
      WBVar01216195
      WBVar01216196
      WBVar01216197
      WBVar01216198
      WBVar01216199
      WBVar01216200
      WBVar01216201
      WBVar01216202
      WBVar01216203
      WBVar01216204
      WBVar01216205
      WBVar01216206
      WBVar01216207
      WBVar01216208
      WBVar01216209
      WBVar01216210
      WBVar01216211
      WBVar01216212
      WBVar00527043
      WBVar00527044
      WBVar00527045
      WBVar00527046
      WBVar00527047
      WBVar00527048
      WBVar00527049
      WBVar00527050
      WBVar00527051
      WBVar00145345
      WBVar00252066
      WBVar02147574
      WBVar01760808
      WBVar01760809
      WBVar01498960
      WBVar01500067
    Strain: WBStrain00003315
      WBStrain00021982
      WBStrain00021978
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (28)
    Paralog: WBGene00007007 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010681 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011304 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: nipi-3 encodes a kinase similar to the human kinase Tribbles homolog 1; nipi-3 functions in the innate immune response, likely upstream of the SEK-1 MAPKK, to upregulate expression of NLP-29, an antimicrobial peptide, in response to fungal infection. Paper_evidence: WBPaper00031666
          Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Feb 2011 00:00:00
      Automated_description: Enables DNA-binding transcription factor binding activity. Involved in defense response to other organism and regulation of gene expression. Predicted to be located in nucleus. Expressed in CAN; hypodermis; motor neurons; pharynx; and touch receptor neurons. Is an ortholog of human TRIB1 (tribbles pseudokinase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K09A9.1
    Corresponding_CDS_history (2)
    Corresponding_transcript: K09A9.1.1
    Other_sequence: CR04824
      CRC00651_1
      CBC12317_1
      CJC06811_1
      CR06179
    Associated_feature: WBsf648817
      WBsf648818
      WBsf655238
      WBsf655239
      WBsf663659
      WBsf663660
      WBsf982306
      WBsf1008281
  Experimental_info: RNAi_result (27)
    Expr_pattern: Chronogram892
      Expr6374
      Expr8070
      Expr12563
      Expr13665
      Expr1027431
      Expr1034682
      Expr1154069
      Expr2014263
      Expr2032503
    Drives_construct: WBCnstr00000508
      WBCnstr00003786
      WBCnstr00006335
      WBCnstr00007217
      WBCnstr00013088
      WBCnstr00031209
    Construct_product: WBCnstr00000508
      WBCnstr00006335
      WBCnstr00007219
      WBCnstr00007220
      WBCnstr00007221
      WBCnstr00007222
      WBCnstr00031209
    Regulate_expr_cluster: WBPaper00050515:nipi-3(fr4)_downregulated
      WBPaper00050515:nipi-3(fr4)_upregulated
    Microarray_results (24)
    Expression_cluster (205)
    Interaction (13)
    WBProcess: WBbiopr:00000001
      WBbiopr:00000039
  Map_info (3)
  Reference (18)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene