WormBase Tree Display for Gene: WBGene00007131
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| WBGene00007131 | SMap | S_parent | Sequence | B0284 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pals-26 | Person_evidence | WBPerson260 | |||||
| Sequence_name | B0284.1 | ||||||||
| Molecular_name | B0284.1 | ||||||||
| WP:CE40594 | |||||||||
| CE40594 | |||||||||
| B0284.1.1 | |||||||||
| Other_name | CELE_B0284.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pals-26 | ||||||||
| DB_info | Database | AceView | gene | 3F467 | |||||
| WormQTL | gene | WBGene00007131 | |||||||
| WormFlux | gene | WBGene00007131 | |||||||
| NDB | locus_tag | CELE_B0284.1 | |||||||
| NCBI | gene | 181902 | |||||||
| RefSeq | mRNA | NM_065481.5 | |||||||
| protein | NP_497882.3 | ||||||||
| NM_065481.8 | |||||||||
| TREEFAM | TREEFAM_ID | TF322628 | |||||||
| UniProt | UniProtAcc | Q17466 | |||||||
| TrEMBL | UniProtAcc | Q17466 | |||||||
| UniProt_GCRP | UniProtAcc | Q17466 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pals | ||||||||
| Allele | WBVar01709972 | ||||||||
| WBVar01999559 | |||||||||
| WBVar01785430 | |||||||||
| WBVar01628450 | |||||||||
| WBVar00821464 | |||||||||
| WBVar00821465 | |||||||||
| WBVar00821466 | |||||||||
| WBVar00821467 | |||||||||
| WBVar00821468 | |||||||||
| WBVar00821469 | |||||||||
| WBVar00821470 | |||||||||
| WBVar00821471 | |||||||||
| WBVar00821472 | |||||||||
| WBVar00821473 | |||||||||
| WBVar00821474 | |||||||||
| WBVar00821475 | |||||||||
| WBVar02034132 | |||||||||
| WBVar00821476 | |||||||||
| WBVar00821477 | |||||||||
| WBVar00821478 | |||||||||
| WBVar00821479 | |||||||||
| WBVar01262990 | |||||||||
| WBVar01644057 | |||||||||
| WBVar01644058 | |||||||||
| WBVar00249449 | |||||||||
| WBVar01607007 | |||||||||
| WBVar00395893 | |||||||||
| WBVar00395894 | |||||||||
| WBVar00395895 | |||||||||
| WBVar00395896 | |||||||||
| WBVar00395897 | |||||||||
| WBVar00395898 | |||||||||
| Strain | WBStrain00003571 | ||||||||
| WBStrain00055222 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3810 | ||||||||
| Ortholog | WBGene00028845 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| CSP26.g3004 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP26.g3005 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g1855 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_V.g18005 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_V.g18455 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00680.g14347 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_019033 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_30075900 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g7434 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00007134 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00007132 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045188 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00007657 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007659 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007660 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including Z1.p; dopaminergic neurons; excretory cell; head mesodermal cell; and male distal tip cell based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including Sodium Chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0284.1 | |||||||
| Corresponding_CDS_history | B0284.1:wp168 | ||||||||
| Corresponding_transcript | B0284.1.1 | ||||||||
| Other_sequence | CRC01710_1 | ||||||||
| CR01454 | |||||||||
| Associated_feature | WBsf981454 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00038863 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038862 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028056 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038864 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072823 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005934 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007067 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram546 | ||||||||
| Expr5037 | |||||||||
| Expr1028371 | |||||||||
| Expr1033068 | |||||||||
| Expr1143055 | |||||||||
| Expr2014699 | |||||||||
| Expr2032934 | |||||||||
| Drives_construct | WBCnstr00004023 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (267) | |||||||||
| Interaction | WBInteraction000271555 | ||||||||
| WBInteraction000278188 | |||||||||
| WBInteraction000469131 | |||||||||
| WBInteraction000578793 | |||||||||
| Map_info (3) | |||||||||
| Reference | WBPaper00061319 | ||||||||
| WBPaper00062345 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
