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WormBase Tree Display for Gene: WBGene00006926

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Name Class

WBGene00006926SMapS_parentSequenceC42D8
IdentityVersion1
NameCGC_namevit-2Person_evidenceWBPerson71
Sequence_nameC42D8.2
Molecular_nameC42D8.2
C42D8.2.1
CE06950
Other_nameCELE_C42D8.2Accession_evidenceNDBBX284606
Public_namevit-2
DB_infoDatabaseWormQTLgeneWBGene00006926
WormFluxgeneWBGene00006926
NDBlocus_tagCELE_C42D8.2
PanthergeneCAEEL|WormBase=WBGene00006926|UniProtKB=P05690
familyPTHR23345
NCBIgene180781
RefSeqproteinNM_076467.7
SwissProtUniProtAccP05690
UniProt_GCRPUniProtAccP05690
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvit
AlleleWBVar00094278Inferred_automaticallyFrom strain object: RB2365
WBVar02153565
WBVar02158884
WBVar01145131
WBVar01145132
WBVar01145133
WBVar01145134
WBVar01145135
WBVar01145136
WBVar01145137
WBVar01145138
WBVar01145139
WBVar01145140
WBVar01145141
WBVar01145142
WBVar01145143
WBVar01145144
WBVar01468782
WBVar02139257
WBVar02139258
WBVar01830471
WBVar01830472
WBVar02148559
WBVar01831994
WBVar01601720
WBVar01601721
WBVar01601722
WBVar00276043
WBVar02152636
WBVar01878795
WBVar01878796
WBVar01878797
WBVar01878798
WBVar01878799
WBVar01878800
WBVar00502941
WBVar00502942
WBVar00502943
WBVar00502944
WBVar00502945
WBVar00502946
WBVar00502947
WBVar00502948
WBVar00502949
WBVar00502950
WBVar00502951
WBVar00502952
WBVar00502953
WBVar00502954
WBVar00502955
WBVar00502956
WBVar00502957
WBVar00502958
WBVar00502959
WBVar00502960
WBVar00502961
WBVar01145098
WBVar01145099
WBVar01145100
WBVar01145101
WBVar01145102
WBVar01145103
WBVar01145104
WBVar01145105
WBVar01145106
WBVar01145107
WBVar01145108
WBVar01145109
WBVar01145110
WBVar01145111
WBVar01145112
WBVar01145113
WBVar01145114
WBVar01145115
WBVar01145116
WBVar01145117
WBVar00601209
WBVar01145118
WBVar01145119
WBVar01145120
WBVar01549624
WBVar01549625
WBVar01145121
WBVar01549626
WBVar01145122
WBVar01549627
WBVar01145123
WBVar01145124
WBVar01145125
WBVar01145126
WBVar01145127
WBVar01145128
WBVar01145129
WBVar01500067
WBVar01145130
Legacy_informationStructural gene for vitellogenin yp170B.
[C.elegansII] NMK. 4.9 kb transcript, specific to adult hermaphrodite intestine, encodes vitellogenin yp170B (67% identity to VIT-5). Extensive promoter analysis. [Speith et al. 1985b; MacMorris et al. 1994; BL]
Strain (11)
RNASeq_FPKM (74)
GO_annotation00038891
00038892
00038893
00038894
00038895
00038896
00038897
00038898
00115036
00115037
Ortholog (64)
ParalogWBGene00006925Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006927Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006929Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006930Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionvit-2 encodes the vitellogenin homolog YP170; vit-2 is expressed in the adult hermaphrodite intestine and VIT-2 is secreted into the pseudocoelomic space before being taken up by developing oocytes; vit-2 expression is regulated in a sex-, stage-, and tissue-specific manner by the ELT-2/GATA and MAB-3 transcription factors.Paper_evidenceWBPaper00003831
WBPaper00004538
WBPaper00032471
WBPaper00001864
WBPaper00003452
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated24 Mar 2014 00:00:00
Automated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Located in cytoplasmic vesicle; vesicle lumen; and yolk granule. Expressed in embryonic cell; gonad; intestine; oocyte; and pseudocoelom.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC42D8.2
Corresponding_CDS_history (2)
Corresponding_transcriptC42D8.2.1
Other_sequence (264)
Associated_feature (19)
Experimental_infoRNAi_resultWBRNAi00095269Inferred_automaticallyRNAi_primary
WBRNAi00042364Inferred_automaticallyRNAi_primary
WBRNAi00095273Inferred_automaticallyRNAi_primary
WBRNAi00063230Inferred_automaticallyRNAi_primary
WBRNAi00001993Inferred_automaticallyRNAi_primary
WBRNAi00063231Inferred_automaticallyRNAi_primary
Expr_patternExpr520
Expr11396
Expr12138
Expr12674
Expr16161
Expr1015447
Expr1032943
Expr1146349
Expr2018001
Expr2036137
Drives_construct (19)
Construct_productWBCnstr00000145
WBCnstr00012417
WBCnstr00018820
WBCnstr00021273
WBCnstr00022596
WBCnstr00034094
WBCnstr00041719
Regulate_expr_clusterWBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
AntibodyWBAntibody00000018
Microarray_results (21)
Expression_cluster (320)
Interaction (317)
Map_infoMapXPosition-6.18804Error0.002606
PositivePositive_cloneC42D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
U32
Pseudo_map_position
Reference (114)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene