WormBase Tree Display for Gene: WBGene00003802

WBGene00003802 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y56A3A
  Identity: Version: 1
    Name (5)
    DB_info: Database: AceView gene 3N7
        WormQTL gene WBGene00003802
        WormFlux gene WBGene00003802
        NDB locus_tag CELE_Y56A3A.17
        Panther gene CAEEL|WormBase=WBGene00003802|UniProtKB=Q7K6X4
          family PTHR23138
        NCBI gene 176623
        RefSeq protein NM_067150.3
        SwissProt UniProtAcc Q7K6X4
        UniProt_GCRP UniProtAcc Q7K6X4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: npp
    Allele: WBVar01499701
      WBVar00093037
      WBVar00865605
      WBVar00865606
      WBVar01963588
      WBVar00865607
      WBVar00865608
      WBVar00865609
      WBVar00865610
      WBVar00865611
      WBVar00865612
      WBVar00865613
      WBVar00865614
      WBVar01449077
      WBVar00865615
      WBVar01449082
      WBVar00865616
      WBVar00865617
      WBVar00865618
      WBVar00865619
      WBVar00865620
      WBVar00865621
      WBVar00865622
      WBVar00296380
      WBVar00237302
      WBVar02122320
      WBVar01500138
      WBVar01500139
      WBVar01499774
      WBVar00217709
      WBVar00217710
      WBVar00217711
      WBVar02121423
      WBVar00217712
      WBVar00217713
      WBVar00217714
      WBVar01499239
      WBVar00217715
      WBVar02121982
      WBVar00101665
      WBVar00566511
      WBVar02019426
      WBVar00259397
      WBVar01953008
      WBVar00250578
      WBVar00270097
      WBVar00270098
      WBVar01919583
      WBVar01919584
      WBVar01336243
      WBVar01336245
      WBVar01409887
      WBVar02122242
      WBVar00410435
      WBVar00410436
      WBVar00410437
      WBVar00410438
      WBVar00410439
      WBVar00410440
    Strain: WBStrain00032230
    RNASeq_FPKM (74)
    GO_annotation: 00082344
      00082345
      00082346
      00082347
      00082348
      00082349
      00082350
      00082351
      00082352
    Ortholog (36)
    Paralog: WBGene00003795 Caenorhabditis elegans From_analysis: Panther
      WBGene00004054 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00077670 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00077603 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00045202 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00004306 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be involved in protein import into nucleus. Predicted to be located in nuclear membrane. Predicted to be part of nuclear pore. Is an ortholog of human NUP50 (nucleoporin 50). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y56A3A.17
    Corresponding_CDS_history: Y56A3A.17a:wp268
    Corresponding_transcript: Y56A3A.17.1
    Other_sequence (49)
    Associated_feature: WBsf645644
      WBsf225870
      WBsf225871
      WBsf225872
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr1019030
      Expr1031788
      Expr1161004
      Expr2014376
      Expr2032617
    Microarray_results (34)
    Expression_cluster (124)
    Interaction (12)
  Map_info: Map: III Position: 13.3871 Error: 0.025155
    Positive: Positive_clone: Y56A3A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5020
        4180
        5445
    Pseudo_map_position
  Reference: WBPaper00006202
    WBPaper00026593
    WBPaper00032108
    WBPaper00033774
    WBPaper00035574
    WBPaper00037568
    WBPaper00038491
    WBPaper00038705
    WBPaper00055090
    WBPaper00065742
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene