WormBase Tree Display for Gene: WBGene00001989

WBGene00001989 SMap: S_parent: Sequence: T12A2
  Identity: Version: 1
    Name: CGC_name: hot-4 Person_evidence: WBPerson42
      Sequence_name: T12A2.16
      Molecular_name: T12A2.16a
        T12A2.16a.1
        CE30393
        T12A2.16b
        CE30394
        T12A2.16b.1
        T12A2.16b.2
      Other_name: CELE_T12A2.16 Accession_evidence: NDB BX284603
      Public_name: hot-4
    DB_info: Database: AceView gene 3H313
        WormQTL gene WBGene00001989
        WormFlux gene WBGene00001989
        NDB locus_tag CELE_T12A2.16
        Panther gene CAEEL|WormBase=WBGene00001989|UniProtKB=H2KYW7
          family PTHR34722
        NCBI gene 175881
        RefSeq protein NM_171155.7
            NM_171874.3
        TREEFAM TREEFAM_ID TF315944
        TrEMBL UniProtAcc H2KYW7
            Q8T3D0
        UniProt_GCRP UniProtAcc H2KYW7
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hot
    Allele: WBVar00265175
      WBVar01952245
      WBVar01500260
      WBVar01628590
      WBVar00598602
      WBVar00399432
      WBVar00399433
      WBVar00399434
      WBVar00399435
      WBVar00399436
      WBVar00399437
      WBVar00399438
      WBVar00832285
      WBVar00399439
      WBVar00832286
      WBVar00832287
      WBVar00399440
      WBVar00399441
      WBVar00832288
      WBVar00399442
      WBVar00832289
      WBVar01495690
      WBVar00832290
      WBVar00399443
      WBVar00832291
      WBVar00399444
      WBVar00832292
      WBVar00399445
      WBVar00832293
      WBVar02147901
      WBVar00832294
      WBVar00832295
      WBVar00832296
      WBVar00832297
      WBVar00832298
      WBVar00832299
      WBVar00832300
      WBVar00832301
      WBVar00832302
      WBVar00832303
      WBVar00832304
      WBVar01893507
      WBVar00832305
      WBVar00832306
      WBVar00832307
      WBVar00832308
      WBVar00832309
      WBVar00832310
      WBVar00832311
      WBVar01566581
      WBVar00832312
      WBVar00832313
      WBVar01566582
      WBVar00832314
      WBVar01566583
      WBVar01566585
      WBVar00832315
      WBVar00832316
      WBVar01566586
      WBVar00832317
      WBVar00832318
      WBVar00832319
      WBVar00832320
      WBVar00832321
      WBVar00832322
      WBVar00832323
      WBVar01722595
      WBVar01446077
      WBVar01446079
      WBVar01446080
      WBVar01645006
      WBVar01446082
      WBVar01446083
      WBVar01645008
      WBVar01446085
      WBVar00066574
      WBVar02132133
      WBVar02132134
      WBVar02018869
      WBVar02018870
      WBVar00062057
      WBVar00062062
      WBVar01837658
      WBVar01837659
      WBVar01541771
      WBVar01541772
      WBVar01903802
    Strain: WBStrain00002171
    RNASeq_FPKM (74)
    GO_annotation: 00021954
      00021955
      00021956
      00021957
    Ortholog (24)
    Paralog: WBGene00001986 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001987 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001988 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00003849 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00001990 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00044484 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00020489 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Predicted to be involved in olfactory behavior and response to odorant. Predicted to be located in axon and neuronal cell body. Expressed in head and tail. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS (2)
    Corresponding_transcript: T12A2.16a.1
      T12A2.16b.1
      T12A2.16b.2
    Other_sequence: CR03737
      ACC30221_1
      FC539761.1
      CRC06492_1
      Dviv_isotig29746
      JI179008.1
      Acan_isotig10904
    Associated_feature (16)
  Experimental_info: RNAi_result: WBRNAi00053154 Inferred_automatically: RNAi_primary
      WBRNAi00005029 Inferred_automatically: RNAi_primary
      WBRNAi00053152 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram334
      Expr6679
      Expr1027258
      Expr1031157
      Expr1156751
      Expr2012542
      Expr2030781
    Drives_construct: WBCnstr00002925
      WBCnstr00036537
    Construct_product: WBCnstr00036537
    Microarray_results (28)
    Expression_cluster (143)
    Interaction: WBInteraction000553260
  Map_info: Map: III Position: -1.40844 Error: 0.000137
    Positive: Positive_clone: T12A2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004498
  Remark: Sequence connection from [Chou JH, Bargmann CI, Sengupta P]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene