WormBase Tree Display for Gene: WBGene00000868
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| WBGene00000868 | SMap | S_parent | Sequence | T06E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cyb-3 | |||||||
| Sequence_name | T06E6.2 | ||||||||
| Molecular_name | T06E6.2a | ||||||||
| T06E6.2a.1 | |||||||||
| CE45171 | |||||||||
| T06E6.2b | |||||||||
| CE45189 | |||||||||
| T06E6.2a.2 | |||||||||
| T06E6.2b.1 | |||||||||
| Other_name | cyb-2 | ||||||||
| CELE_T06E6.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | cyb-3 | ||||||||
| DB_info | Database | AceView | gene | 5P877 | |||||
| WormQTL | gene | WBGene00000868 | |||||||
| WormFlux | gene | WBGene00000868 | |||||||
| NDB | locus_tag | CELE_T06E6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000868|UniProtKB=Q10654 | |||||||
| family | PTHR10177 | ||||||||
| NCBI | gene | 180040 | |||||||
| RefSeq | protein | NM_074424.10 | |||||||
| NM_001028941.4 | |||||||||
| SwissProt | UniProtAcc | Q10654 | |||||||
| TREEFAM | TREEFAM_ID | TF101001 | |||||||
| UniProt_GCRP | UniProtAcc | Q10654 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyb | ||||||||
| Allele | WBVar02148454 | ||||||||
| WBVar01745259 | |||||||||
| WBVar01809220 | |||||||||
| WBVar01073501 | |||||||||
| WBVar01073502 | |||||||||
| WBVar01073503 | |||||||||
| WBVar01073504 | |||||||||
| WBVar01073505 | |||||||||
| WBVar01073506 | |||||||||
| WBVar01073507 | |||||||||
| WBVar01073508 | |||||||||
| WBVar01073509 | |||||||||
| WBVar01073510 | |||||||||
| WBVar01073511 | |||||||||
| WBVar01073512 | |||||||||
| WBVar01073513 | |||||||||
| WBVar01073514 | |||||||||
| WBVar00478943 | |||||||||
| WBVar01073515 | |||||||||
| WBVar01073516 | |||||||||
| WBVar00478944 | |||||||||
| WBVar00478945 | |||||||||
| WBVar01073517 | |||||||||
| WBVar00478946 | |||||||||
| WBVar01073518 | |||||||||
| WBVar02122678 | |||||||||
| WBVar01590642 | |||||||||
| WBVar01590643 | |||||||||
| WBVar01590644 | |||||||||
| WBVar02124725 | |||||||||
| WBVar01500160 | |||||||||
| WBVar00020820 | |||||||||
| WBVar01777002 | |||||||||
| WBVar01485085 | |||||||||
| WBVar01777003 | |||||||||
| WBVar01485086 | |||||||||
| WBVar01485087 | |||||||||
| WBVar01485088 | |||||||||
| WBVar01485089 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01896970 | |||||||||
| WBVar02050001 | |||||||||
| WBVar00145602 | |||||||||
| WBVar02124624 | |||||||||
| WBVar01499316 | |||||||||
| WBVar02124827 | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted cyclin B. [KB] | ||||||||
| Strain | WBStrain00035729 | ||||||||
| WBStrain00005799 | |||||||||
| WBStrain00054803 | |||||||||
| WBStrain00054976 | |||||||||
| WBStrain00048566 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (30) | |||||||||
| Ortholog (55) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Concise_description | cyb-3 encodes one of four C. elegans cyclin B family members that is most closely related to the B3-type cyclins; cyb-3 is required for a number of dynein-related mitotic processes and specifically for initiation of anaphase chromosome segregation; cyb-3 is also required for completion of meiosis II and proper pronuclear migration, centrosome maturation, and pronuclear condensation in the fertilized oocyte; cyb-3 is also essential for embryonic viability. | Paper_evidence | WBPaper00004540 | |||||
| WBPaper00005598 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00037839 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 01 Apr 2011 00:00:00 | ||||||||
| Automated_description | Enables cyclin-dependent protein serine/threonine kinase regulator activity. Involved in several processes, including chromosome organization; regulation of cell cycle; and sexual reproduction. Acts upstream of or within nematode male tail tip morphogenesis. Located in cytoplasm and nucleus. Expressed in several structures, including EMS; Psub2; germ cell; germ line; and male gonad. Is an ortholog of human CCNB3 (cyclin B3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06E6.2a | |||||||
| T06E6.2b | |||||||||
| Corresponding_CDS_history | T06E6.2:wp51 | ||||||||
| T06E6.2a:wp216 | |||||||||
| T06E6.2b:wp216 | |||||||||
| Corresponding_transcript | T06E6.2a.1 | ||||||||
| T06E6.2a.2 | |||||||||
| T06E6.2b.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00099335 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00078816 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101263 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097998 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101024 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101244 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091623 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106165 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101196 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099941 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101129 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027641 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101282 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098024 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098021 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009133 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000203 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00100650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099537 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106166 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00100463 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052666 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007566 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026216 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00100837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106663 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085668 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00100276 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00100089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091622 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (15) | |||||||||
| Drives_construct | WBCnstr00037236 | ||||||||
| WBCnstr00041763 | |||||||||
| Construct_product | WBCnstr00001758 | ||||||||
| WBCnstr00015134 | |||||||||
| WBCnstr00015136 | |||||||||
| WBCnstr00037236 | |||||||||
| WBCnstr00041763 | |||||||||
| Antibody | WBAntibody00001667 | ||||||||
| WBAntibody00002046 | |||||||||
| WBAntibody00002047 | |||||||||
| WBAntibody00002745 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (234) | |||||||||
| Interaction (215) | |||||||||
| WBProcess | WBbiopr:00000073 | ||||||||
| Map_info | Map | V | Position | 7.97972 | Error | 0.013538 | |||
| Positive | Positive_clone | KB#6A2A | |||||||
| T06E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 4246 | |||||||
| 5380 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (47) | |||||||||
| Remark | [Monique Lorson] gene has homology to cyclin B3 genes in other organisms. 11/12/99 | ||||||||
| This gene has been defined and published both as cyb-2 and cyb-3. This old cyb-2 name should not be confused with the new cyb-2.1 and cyb-2.2 genes [020808 krb] | |||||||||
| Sequence connection from [Xu H, Bennett KL] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
