WormBase Tree Display for Gene: WBGene00001790

WBGene00001790 Evidence: Person_evidence: WBPerson1846
  SMap: S_parent: Sequence: D1053
  Identity: Version: 1
    Name: CGC_name: gst-42
      Sequence_name: D1053.1
      Molecular_name: D1053.1
        D1053.1.1
        CE03099
      Other_name: CELE_D1053.1 Accession_evidence: NDB BX284606
      Public_name: gst-42
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gst
    Allele: WBVar01620840
      WBVar01499887
      WBVar01499888
      WBVar01499710
      WBVar00083291
      WBVar00083292
      WBVar01189977
      WBVar01189978
      WBVar00093291
      WBVar01189979
      WBVar01189980
      WBVar01189981
      WBVar01189982
      WBVar01189983
      WBVar01189984
      WBVar01189985
      WBVar01189986
      WBVar01189987
      WBVar01189988
      WBVar01189989
      WBVar01987765
      WBVar01654870
      WBVar02009174
      WBVar01471323
      WBVar00518037
      WBVar00518038
      WBVar00518039
      WBVar00518040
      WBVar01759502
      WBVar01498960
      WBVar01500067
      WBVar01620839
    Strain: WBStrain00033920
      WBStrain00032388
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog (32)
    Paralog: WBGene00021817 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001791 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001365 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001371 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001792 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008920 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015337 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016204 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019636 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00043097 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: gst-42 is orthologous to the human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known as MALEYLACETOACETATE ISOMERASE; GSTZ1; OMIM:603758), which when mutated is thought to lead to a variety of type I tyrosinemia. Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables identical protein binding activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to be located in mitochondrion. Expressed in intestine. Is an ortholog of human GSTZ1 (glutathione S-transferase zeta 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D1053.1
    Corresponding_transcript: D1053.1.1
    Other_sequence: EX911700.1
      EX911426.1
      EX009670.1
      ES413741.1
      HBC01872_1
      ES741435.1
      AE00547
      Dviv_isotig11077
      EX012607.1
      FG619560.1
      CJC14190_1
      Hbac_isotig02757
      Dviv_isotig11080
      ES413881.1
      Acan_isotig07325
      Dviv_isotig11079
      ES739629.1
      ES413821.1
      ES742972.1
      EX914032.1
      EX010518.1
      EX011728.1
      Dviv_isotig11081
      ES742644.1
      Dviv_isotig11078
      EX914418.1
      AYC01451_1
    Associated_feature: WBsf654443
      WBsf671056
      WBsf671057
      WBsf1007098
      WBsf1023927
      WBsf237997
      WBsf237998
      WBsf237999
      WBsf238000
      WBsf238001
  Experimental_info: RNAi_result: WBRNAi00115551 Inferred_automatically: RNAi_primary
      WBRNAi00043381 Inferred_automatically: RNAi_primary
      WBRNAi00030339 Inferred_automatically: RNAi_primary
      WBRNAi00115488 Inferred_automatically: RNAi_primary
      WBRNAi00012524 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram232
      Expr3792
      Expr1015984
      Expr1031053
      Expr1147367
      Expr2012325
      Expr2030562
    Drives_construct: WBCnstr00001071
      WBCnstr00011663
      WBCnstr00015944
      WBCnstr00036682
    Construct_product: WBCnstr00036682
    Microarray_results (19)
    Expression_cluster (204)
    Interaction (60)
  Map_info: Map: X Position: 6.53295 Error: 0.086971
    Positive: Positive_clone: D1053 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006465
    WBPaper00031468
    WBPaper00032062
    WBPaper00035663
    WBPaper00038491
    WBPaper00055090
    WBPaper00057218
    WBPaper00065140
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene