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WormBase Tree Display for Gene: WBGene00008891

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Name Class

WBGene00008891SMapS_parentSequenceF16H6
IdentityVersion2
NameCGC_nameclec-42Person_evidenceWBPerson655
Sequence_nameF16H6.1
Molecular_nameF16H6.1
F16H6.1.1
CE18597
Other_nameCELE_F16H6.1Accession_evidenceNDBBX284605
Public_nameclec-42
DB_infoDatabaseAceViewgene5S673
WormQTLgeneWBGene00008891
WormFluxgeneWBGene00008891
NDBlocus_tagCELE_F16H6.1
PanthergeneCAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91
familyPTHR22991
NCBIgene180189
RefSeqproteinNM_075156.4
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccQ9XV91
UniProt_GCRPUniProtAccQ9XV91
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2005 13:53:46WBPerson2970Name_changeCGC_nameclec-42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
AlleleWBVar00056159
WBVar00056164
WBVar00091255
WBVar00056169
WBVar01492530
WBVar01499709
WBVar01875353
WBVar01875354
WBVar01875355
WBVar01875356
WBVar01897206
WBVar01897207
WBVar01689870
WBVar01465097
WBVar01465098
WBVar01499566
WBVar01998594
WBVar00091142
WBVar01822171
WBVar01822172
WBVar01091767
WBVar01091768
WBVar01091769
WBVar01091770
WBVar01091771
WBVar01091772
WBVar01091773
WBVar01091774
WBVar01091775
WBVar01091776
WBVar01091777
WBVar01091778
WBVar01091779
WBVar01091780
WBVar01091781
WBVar01091782
WBVar01091783
WBVar02122168
WBVar01749392
WBVar01749393
WBVar02125182
WBVar02121809
WBVar01654701
WBVar01654702
WBVar01845787
WBVar01845788
WBVar01499446
WBVar01654703
WBVar01845789
WBVar01654704
WBVar01845790
WBVar02123859
WBVar01498549
WBVar02123315
WBVar02121660
WBVar02124974
WBVar01499299
WBVar02124434
WBVar01638003
WBVar02121311
WBVar01638004
WBVar01991935
WBVar01638005
WBVar01638006
WBVar01638007
WBVar01638008
WBVar01638009
WBVar01638010
WBVar01909159
WBVar01638011
WBVar00485141
WBVar02123536
WBVar01498957
WBVar00485142
WBVar00485143
WBVar02124275
WBVar00485144
WBVar00056154
WBVar00485145
WBVar00485146
WBVar00485147
RNASeq_FPKM (74)
OrthologWBGene00031014Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00138451Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00118481Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00117518Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00190088Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00058975Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
CBOVI.g636Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4605Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18408Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15776Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14229Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18068Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1854Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14109Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21861Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9518Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00225.g7373Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06970.g20600Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19626Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold461.g1492Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02980.g28630Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_017708Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00644Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01294Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04334Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09530Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10034Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10755Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50272600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50273000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50273100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50286000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17636Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00090674Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092755Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093626Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094198Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094223Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094226Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094324Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094364Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094757Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094758Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094763Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095335Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099573Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099582Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099584Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101060Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101173Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102635Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102637Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102645Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102649Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103431Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111773Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203683Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275137Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275520Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275536Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275539Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275542Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275755Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275777Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276599Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276684Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276687Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276690Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277350Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277932Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280153Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281064Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281273Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281471Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281740Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281760Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00282834Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259062Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (52)
Structured_descriptionAutomated_descriptionExpressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF16H6.1
Corresponding_transcriptF16H6.1.1
Associated_featureWBsf647675
WBsf1002843
WBsf1021424
WBsf233158
Experimental_info (7)
Map_infoMapVPosition14.7815Error0.044228
PositivePositive_cloneF16H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026629
WBPaper00038491
WBPaper00057576
WBPaper00061178
WBPaper00061236
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene