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WormBase Tree Display for Gene: WBGene00099573

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Name Class

WBGene00099573SMapS_parentSequencePPA_ChrV
IdentityVersion3
NameSequence_namePPA10019
Molecular_namePPA10019
PPA10019.1
PP52744
Other_nameGENEPREDICTION_SNAP300000066555
GENEPREDICTION_SNAP300000066556
GENEPREDICTION_SNAP300000066557
UMM-S60-4.15Person_evidenceWBPerson606
Public_namePPA10019
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099574
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099575
Acquires_mergeWBGene00099574
WBGene00099575
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.413343From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
1.24003From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (110)
Paralog (56)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-41; clec-52; and clec-49.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA10019
Corresponding_transcriptPPA10019.1
Other_sequenceJI468485.1
Experimental_infoMicroarray_resultsGPL14372_Probes_1589
GPL14372_Probes_1591
GPL14372_Probes_1592
GPL14372_Probes_1593
GPL14372_Probes_1595
GPL14372_Probes_38500
GPL14372_Probes_38502
GPL14372_Probes_38509
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene