WormBase Tree Display for Gene: WBGene00015147

WBGene00015147 SMap: S_parent: Sequence: B0336
  Identity: Version: 1
    Name: Sequence_name: B0336.7
      Molecular_name: B0336.7a
        B0336.7a.1
        CE29546
        B0336.7b
        CE37741
        B0336.7b.1
      Other_name: CELE_B0336.7 Accession_evidence: NDB BX284603
      Public_name: B0336.7
    DB_info: Database: AceView gene 3G784
        WormQTL gene WBGene00015147
        WormFlux gene WBGene00015147
        NDB locus_tag CELE_B0336.7
        NCBI gene 175792
        RefSeq protein NM_001392106.1
            NM_065826.4
        TrEMBL UniProtAcc Q5DX39
            H2KY76
        UniProt_GCRP UniProtAcc H2KY76
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00269767
      WBVar00250621
      WBVar01500260
      WBVar01962795
      WBVar01962796
      WBVar01330425
      WBVar01962797
      WBVar01607057
      WBVar00829167
      WBVar00829168
      WBVar00829169
      WBVar00829170
      WBVar00829171
      WBVar00829172
      WBVar00829173
      WBVar00829174
      WBVar00829175
      WBVar00829176
      WBVar00829177
      WBVar01500122
      WBVar00829178
      WBVar01500123
      WBVar00829179
      WBVar00829180
      WBVar00829181
      WBVar00316462
      WBVar00316463
      WBVar00056655
      WBVar00061362
      WBVar00061367
      WBVar01566432
      WBVar01566433
      WBVar00269768
      WBVar01479796
      WBVar02095907
      WBVar01983903
      WBVar00303288
      WBVar00398471
      WBVar00398472
      WBVar00398473
      WBVar01263831
      WBVar01263832
    RNASeq_FPKM (74)
    GO_annotation: 00021398
      00021399
    Contained_in_operon: CEOP3324
    Ortholog (23)
    Structured_description: Concise_description: B0336.7 encodes, by alternative splicing, two isoforms of a protein witha THAP or THAP-like domain; other proteins with such domains includeLIN-15A, LIN-15B, LIN-36, and HIM-17 (which all interact withLIN-35/Rb), as well as CDC-14B, CTB-1, GON-14, and ~100 other proteinssuch as Drosophila P element transposase and human nuclear proapoptoticfactor THAP1; B0336.7 is expressed in intestine and amphid neurons. Paper_evidence: WBPaper00028973
          Curator_confirmed: WBPerson567
          Date_last_updated: 08 May 2007 00:00:00
      Automated_description: Predicted to enable DNA binding activity. Expressed in intestine and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0336.7a
      B0336.7b
    Corresponding_CDS_history: B0336.7b:wp135
    Corresponding_transcript: B0336.7a.1
      B0336.7b.1
    Other_sequence (15)
    Associated_feature: WBsf978757
      WBsf226718
    Transcription_factor: WBTranscriptionFactor000947
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr2057
      Expr1018798
      Expr1036480
      Expr1143129
      Expr2000150
      Expr2018368
    Drives_construct: WBCnstr00029051
    Construct_product: WBCnstr00016610
      WBCnstr00029051
      WBCnstr00038845
    Microarray_results: SMD_B0336.7
      SMD_B0336.7:2
      SMD_B0336.8
      183642_s_at
      A_12_P108428
      A_12_P116950
      Aff_B0336.7
      GPL13394_WBGene00015147
      GPL13914_B0336.7
      GPL14144_B0336.7a_1348-1407_0.909_16_C
      GPL14144_B0336.7a_1414-1473_0.950_2_B
      GPL14144_B0336.7a_389-448_0.872_32_A
      GPL19516_CGZ0000799
      GPL19516_CGZ0000800
      GPL21109_B0336.7a
      GPL3518_CE29546
      GPL8304_CE_WBGene00015147_A
      GPL8304_CE_WBGene00015147_C
      GPL8673_B0336_7aP00102
      GPL8673_B0336_7aP00133
      GPL8673_B0336_7aP00219
      GPL8673_B0336_7bP00102
      GPL8673_B0336_7bP00831
      GPL8673_B0336_7bP01143
      GPL9450_B0336.7a
      cea2.c.16236
    Expression_cluster (98)
    Interaction (28)
  Map_info: Positive: Positive_clone: B0336 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.45315
  Reference: WBPaper00027882
    WBPaper00060662
  Method: Gene