WormBase Tree Display for Variation: WBVar00269768
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WBVar00269768 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00269768 | |||
Other_name | uCE3-926 | ||||
B0336.7b.1:c.-45+25del | |||||
B0336.7a.1:c.226+25del | |||||
HGVSg | CHROMOSOME_III:g.5697049del | ||||
Sequence_details | SMap | S_parent | Sequence | B0336 | |
Flanking_sequences | TTTAAAAGTTTTTCAAAAGATAAATTGGACCTGGAAGATCAAATTTTCAATTTCCCAAAAAAATGTTTGGAAACTTCAAAACTTGATTTTTTTCAATTTT | CCAGTAGTTCTATAAATAATGAACCTTCGTAGTCAATTTTCATGCTAACAGGAATTTCTTCATGATTGCTCGAAGTTGGCTCCTGATCACTAATATATTC | |||
Mapping_target | B0336 | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00015147 | |||
Transcript | B0336.7b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0336.7b.1:c.-45+25del | ||||
Intron_number | 1/6 | ||||
B0336.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0336.7a.1:c.226+25del | ||||
Intron_number | 3/7 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |