WormBase Tree Display for Gene: WBGene00006769
expand all nodes | collapse all nodes | view schema
WBGene00006769 | SMap | S_parent | Sequence | Y37E11C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | unc-33 | Person_evidence | WBPerson261 | |||||
Sequence_name | Y37E11C.1 | ||||||||
Molecular_name (9) | |||||||||
Other_name | CELE_Y37E11C.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | unc-33 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00006769 | |||||
WormFlux | gene | WBGene00006769 | |||||||
NDB | locus_tag | CELE_Y37E11C.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006769|UniProtKB=Q01630 | |||||||
family | PTHR11647 | ||||||||
NCBI | gene | 177112 | |||||||
RefSeq | protein | NM_001380147.1 | |||||||
NM_001380148.1 | |||||||||
NM_001038349.4 | |||||||||
SwissProt | UniProtAcc | Q01630 | |||||||
TrEMBL | UniProtAcc | U4PLJ8 | |||||||
UniProt_GCRP | UniProtAcc | Q01630 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:42 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Reference_allele | WBVar00143034 | ||||||||
Allele | WBVar00143034 | Inferred_automatically (13) | |||||||
WBVar00143818 | Inferred_automatically | From strain object: AMH23 | |||||||
From strain object: AMH31 | |||||||||
From strain object: AMH46 | |||||||||
From strain object: AMH71 | |||||||||
From strain object: CB1193 | |||||||||
WBVar00089156 | Inferred_automatically | From strain object: AMH3 | |||||||
From strain object: AMH32 | |||||||||
From strain object: AMH36 | |||||||||
From strain object: AMH57 | |||||||||
From strain object: AMH69 | |||||||||
From strain object: SP1382 | |||||||||
WBVar00143870 | Inferred_automatically | From strain object: CB1261 | |||||||
WBVar00143308 | Inferred_automatically | From strain object: CB572 | |||||||
WBVar00088532 | Inferred_automatically | From strain object: DR7 | |||||||
WBVar00089123 | Inferred_automatically | From strain object: SP998 | |||||||
WBVar00241616 | |||||||||
WBVar00241546 | |||||||||
WBVar00143441 | |||||||||
WBVar00143939 | |||||||||
WBVar00603898 | |||||||||
WBVar00603899 | |||||||||
WBVar00899099 | |||||||||
WBVar00899100 | |||||||||
WBVar00899101 | |||||||||
WBVar00899102 | |||||||||
WBVar00899103 | |||||||||
WBVar00899104 | |||||||||
WBVar01514860 | |||||||||
WBVar00899105 | |||||||||
WBVar00899106 | |||||||||
WBVar01514861 | |||||||||
WBVar01514862 | |||||||||
WBVar00899107 | |||||||||
WBVar00899108 | |||||||||
WBVar01514863 | |||||||||
WBVar01451750 | |||||||||
WBVar00899109 | |||||||||
WBVar01514864 | |||||||||
WBVar01451751 | |||||||||
WBVar01668476 | |||||||||
WBVar01514865 | |||||||||
WBVar01451752 | |||||||||
WBVar01668477 | |||||||||
WBVar00899110 | |||||||||
WBVar01668478 | |||||||||
WBVar01514866 | |||||||||
WBVar00899111 | |||||||||
WBVar00899112 | |||||||||
WBVar01514867 | |||||||||
WBVar00899113 | |||||||||
WBVar01514868 | |||||||||
WBVar00899114 | |||||||||
WBVar01514869 | |||||||||
WBVar00899115 | |||||||||
WBVar00899116 | |||||||||
WBVar00899117 | |||||||||
WBVar01630321 | |||||||||
WBVar02053786 | |||||||||
WBVar00899118 | |||||||||
WBVar01630322 | |||||||||
WBVar01630323 | |||||||||
WBVar00600858 | |||||||||
WBVar00899119 | |||||||||
WBVar01630324 | |||||||||
WBVar00899120 | |||||||||
WBVar01630325 | |||||||||
WBVar01922842 | |||||||||
WBVar00899121 | |||||||||
WBVar00899122 | |||||||||
WBVar01630326 | |||||||||
WBVar01922843 | |||||||||
WBVar01630327 | |||||||||
WBVar00899123 | |||||||||
WBVar01922844 | |||||||||
WBVar01630328 | |||||||||
WBVar01922845 | |||||||||
WBVar00899124 | |||||||||
WBVar01922846 | |||||||||
WBVar00899125 | |||||||||
WBVar01630329 | |||||||||
WBVar01922847 | |||||||||
WBVar01630330 | |||||||||
WBVar00899126 | |||||||||
WBVar00899127 | |||||||||
WBVar01922848 | |||||||||
WBVar01630331 | |||||||||
WBVar00899128 | |||||||||
WBVar01630332 | |||||||||
WBVar01922849 | |||||||||
WBVar00899129 | |||||||||
WBVar00899130 | |||||||||
WBVar00899131 | |||||||||
WBVar00899132 | |||||||||
WBVar00899133 | |||||||||
WBVar00899134 | |||||||||
WBVar00899135 | |||||||||
WBVar00899136 | |||||||||
WBVar00899137 | |||||||||
WBVar00899138 | |||||||||
WBVar00899139 | |||||||||
WBVar00899140 | |||||||||
WBVar00899141 | |||||||||
WBVar00899142 | |||||||||
WBVar02096170 | |||||||||
WBVar00899143 | |||||||||
WBVar00899144 | |||||||||
WBVar02146401 | |||||||||
WBVar00899145 | |||||||||
WBVar00899146 | |||||||||
WBVar00899147 | |||||||||
WBVar00899148 | |||||||||
WBVar00899149 | |||||||||
WBVar00899150 | |||||||||
WBVar00899151 | |||||||||
WBVar00899152 | |||||||||
WBVar01990720 | |||||||||
WBVar00899153 | |||||||||
WBVar01990721 | |||||||||
WBVar00899154 | |||||||||
WBVar02103542 | |||||||||
WBVar01990722 | |||||||||
WBVar00899155 | |||||||||
WBVar02103543 | |||||||||
WBVar01990723 | |||||||||
WBVar00899156 | |||||||||
WBVar00899157 | |||||||||
WBVar00899158 | |||||||||
WBVar00899159 | |||||||||
WBVar00899160 | |||||||||
WBVar00899161 | |||||||||
WBVar00899162 | |||||||||
WBVar01896522 | |||||||||
WBVar02113683 | |||||||||
WBVar01898925 | |||||||||
WBVar00253108 | |||||||||
WBVar02133608 | |||||||||
WBVar02133609 | |||||||||
WBVar01580732 | |||||||||
WBVar01580733 | |||||||||
WBVar01965894 | |||||||||
WBVar01965895 | |||||||||
WBVar01965896 | |||||||||
WBVar01965897 | |||||||||
WBVar00187491 | |||||||||
WBVar01965898 | |||||||||
WBVar00187492 | |||||||||
WBVar01965899 | |||||||||
WBVar00187493 | |||||||||
WBVar00187494 | |||||||||
WBVar00187495 | |||||||||
WBVar00187496 | |||||||||
WBVar01846894 | |||||||||
WBVar00187497 | |||||||||
WBVar00187498 | |||||||||
WBVar00187499 | |||||||||
WBVar00187500 | |||||||||
WBVar00187501 | |||||||||
WBVar01499633 | |||||||||
WBVar00187502 | |||||||||
WBVar00187503 | |||||||||
WBVar00187504 | |||||||||
WBVar00187505 | |||||||||
WBVar01838986 | |||||||||
WBVar00187506 | |||||||||
WBVar00187507 | |||||||||
WBVar00421422 | |||||||||
WBVar01838987 | |||||||||
WBVar00421423 | |||||||||
WBVar01838988 | |||||||||
WBVar00187508 | |||||||||
WBVar00421424 | |||||||||
WBVar00187509 | |||||||||
WBVar00421425 | |||||||||
WBVar00187510 | |||||||||
WBVar00421426 | |||||||||
WBVar00421427 | |||||||||
WBVar00421428 | |||||||||
WBVar00421429 | |||||||||
WBVar00421430 | |||||||||
WBVar00421431 | |||||||||
WBVar00421432 | |||||||||
WBVar00421433 | |||||||||
WBVar00421434 | |||||||||
WBVar00421435 | |||||||||
WBVar00421436 | |||||||||
WBVar00421437 | |||||||||
WBVar00421438 | |||||||||
WBVar00421439 | |||||||||
WBVar00246950 | |||||||||
WBVar00421440 | |||||||||
WBVar00421441 | |||||||||
WBVar00421442 | |||||||||
WBVar02020388 | |||||||||
WBVar00421443 | |||||||||
WBVar02020389 | |||||||||
WBVar01481627 | |||||||||
WBVar00421444 | |||||||||
WBVar02020390 | |||||||||
WBVar00421445 | |||||||||
WBVar01481628 | |||||||||
WBVar02020391 | |||||||||
WBVar01481629 | |||||||||
WBVar02020392 | |||||||||
WBVar02020393 | |||||||||
WBVar02020394 | |||||||||
WBVar01497089 | |||||||||
WBVar02075986 | |||||||||
WBVar01913405 | |||||||||
WBVar01913406 | |||||||||
WBVar01727008 | |||||||||
WBVar01727009 | |||||||||
WBVar00571374 | |||||||||
WBVar01727010 | |||||||||
WBVar00571375 | |||||||||
WBVar01727011 | |||||||||
WBVar02036846 | |||||||||
WBVar01727012 | |||||||||
WBVar00571377 | |||||||||
WBVar01727013 | |||||||||
WBVar01727014 | |||||||||
WBVar01727015 | |||||||||
WBVar01727016 | |||||||||
WBVar01727017 | |||||||||
WBVar01727018 | |||||||||
WBVar01727019 | |||||||||
WBVar02070965 | |||||||||
WBVar00261850 | |||||||||
WBVar02070966 | |||||||||
WBVar01727020 | |||||||||
WBVar01727021 | |||||||||
WBVar00270444 | |||||||||
WBVar00270445 | |||||||||
Possibly_affected_by | WBVar02156987 | ||||||||
Legacy_information | e204 : very slow almost paralysed tends to curl dumpyish; weak FITC uptake; amphid phasmid PDE axons abnormal; abnormal neuronal microtubules. ES3 ME0. NA5 (e572 e735). | ||||||||
See also e572, e1193, e1261, e1358 | |||||||||
[C.elegansII] e204 : very slow, almost paralysed; tends to curl; dumpyish; weak FITC uptake; amphid, phasmid, PDE, PVP axons abnormal; multiple defects in axonogenesis; abnormally abundant neuronal microtubules. ES3 ME0. OA>10: e572, e735, e1358, m7,mn260::Tc4, rh1030::Tc4, etc. Cloned: 2.8, 3.3, 3.8 kb transcripts (different 5' ends) encoding predicted 523 aa, 679 aa, 854 aa proteins with similarity to collapsin??? Antibody stains all neuron processes in larvae and adults. [Hedgecock et al. 1985; Li et al. 1992; EH; SP] | |||||||||
[Li W] mn260 is Tc4 insertion in exon VII of longest (3.8kb) unc-33 transcript. rh1030 same insertion site, modified Tc4 element. | |||||||||
Strain (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (28) | |||||||||
Contained_in_operon | CEOP4092 | ||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000963 | Caenorhabditis elegans | From_analysis (2) | ||||||
WBGene00000964 | Caenorhabditis elegans | From_analysis (2) | |||||||
Structured_description | Concise_description | unc-33 encodes a conserved member of the CRMP/TOAD/Ulip/DRP family of proteins that includes mammalian CRMP-2 (Collapsin response mediator protein-2), which is essential for axon guidance and axonogenesis; in C. elegans, unc-33 activity is required for several biological processes including outgrowth and guidance of sensory, motor, and interneurons, sex myoblast migration, normal body movement and morphology, egg laying, and defecation; by homology to CRMP-2, UNC-33 is predicted to bind tubulin heterodimers and promote microtubule assembly, thereby regulating the extension and branching of cellular projections during neuronal polarization; UNC-33 is reportedly expressed exclusively in axonal processes from after early embryogenesis through larval and adult stages. | Paper_evidence | WBPaper00001622 | |||||
WBPaper00002665 | |||||||||
WBPaper00004362 | |||||||||
WBPaper00010044 | |||||||||
WBPaper00025204 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 06 Jun 2005 00:00:00 | ||||||||
Automated_description | Enables filamin binding activity; protein heterodimerization activity; and protein homodimerization activity. Involved in several processes, including axon guidance; establishment or maintenance of cytoskeleton polarity; and regulation of locomotion. Located in neuron projection. Expressed in amphid socket cell; neuroblasts; neurons; pharyngeal cell; and somatic nervous system. Is an ortholog of human DPYSL2 (dihydropyrimidinase like 2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y37E11C.1a | |||||||
Y37E11C.1b | |||||||||
Y37E11C.1c | |||||||||
Corresponding_CDS_history | Y37E11C.1:wp82 | ||||||||
Y37E11C.1a:wp145 | |||||||||
Y37E11C.1b:wp145 | |||||||||
Y37E11C.1c:wp145 | |||||||||
Y37E11C.1c:wp273 | |||||||||
Corresponding_transcript | Y37E11C.1a.1 | ||||||||
Y37E11C.1b.1 | |||||||||
Y37E11C.1c.1 | |||||||||
Other_sequence (38) | |||||||||
Associated_feature (12) | |||||||||
Experimental_info | RNAi_result | WBRNAi00103588 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020239 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086120 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055925 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055924 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089774 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090316 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030274 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090157 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089998 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00001590 | ||||||||
WBCnstr00001591 | |||||||||
WBCnstr00006869 | |||||||||
Construct_product (15) | |||||||||
Antibody | WBAntibody00000953 | ||||||||
WBAntibody00000954 | |||||||||
WBAntibody00001546 | |||||||||
WBAntibody00001788 | |||||||||
WBAntibody00001922 | |||||||||
WBAntibody00002299 | |||||||||
Microarray_results (28) | |||||||||
Expression_cluster (148) | |||||||||
Interaction (69) | |||||||||
WBProcess | WBbiopr:00000010 | ||||||||
Map_info | Map | IV | Position | -3.30458 | Error | 0.013709 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | mDp4 | |||||||
Positive_clone | EH#143 | ||||||||
Y37E11 | |||||||||
Y37E11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | 2_point | 99 | |||||||
484 | |||||||||
824 | |||||||||
1643 | |||||||||
3276 | |||||||||
Multi_point (15) | |||||||||
Pos_neg_data | 9110 | ||||||||
Reference (124) | |||||||||
Remark | extracted from Li et al. (1992) | ||||||||
sequence match was given and M57.b and.c but theses overlap with Y37E11C.c which has not been annotated yet. sdm 11/00. will probably acquire name Y37E11C.1 | |||||||||
Method | Gene |