WormBase Tree Display for Gene: WBGene00023209

WBGene00023209 SMap: S_parent: Sequence: ZC513
  Identity: Version: 2
    Name: Sequence_name: ZC513.7
      Molecular_name: ZC513.7
      Other_name: CELE_ZC513.7 Accession_evidence: NDB BX284605
      Public_name: ZC513.7
    DB_info: Database: WormQTL gene WBGene00023209
        NDB locus_tag CELE_ZC513.7
        NCBI gene 179186
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:39:11 WBPerson1971 Event: Imported: Initial conversion from Transcript class of WS125
        2 27 Jun 2008 10:06:42 WBPerson1867 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele: WBVar01499899
      WBVar01499900
      WBVar01901072
      WBVar00463834
      WBVar00463835
      WBVar00213251
      WBVar01500129
      WBVar01028614
      WBVar01028615
      WBVar01028616
      WBVar01028617
      WBVar01028618
      WBVar01028619
      WBVar01028620
      WBVar01028621
      WBVar01028622
      WBVar01028623
      WBVar00099118
      WBVar01499056
      WBVar01499496
      WBVar01499316
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Enriched in coelomocyte; germ line; head mesodermal cell; intestine; and sensory neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; rrf-3; and gld-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; rotenone; and Alovudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: ZC513.7:wp112
    Corresponding_transcript_history: ZC513.7:wp192
    Corresponding_pseudogene: ZC513.7
    Other_sequence: CR02227
      CRC03362_1
      CBC03189_1
    Associated_feature: WBsf652822
      WBsf652823
      WBsf652824
      WBsf669140
  Experimental_info: Microarray_results: SMD_ZC513.7
      173640_at
      184025_s_at
      A_12_P105965
      A_12_P175514
      GPL19516_CGZ0056027
      GPL21109_ZC513.7
      GPL9450_ZC513.7
      cea2.c.40459
    Expression_cluster: WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045316:prg-1_upregulated_L3
      WBPaper00045521:Spermatogenic
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00046024:sleep_downregulated_oscillating
      WBPaper00049498:npr-1(ur89)_regulated_8
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053302:stavudine_72h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053814:25C_upregulated_OP50
      WBPaper00053814:25C_upregulated_PY79
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00059224:tph-1(mg280)_upregulated
      WBPaper00059598:HeatShock_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:kin-29_2839-unc-9_3883
      WBPaper00061527:rgs-2_11061-pde-1
      WBPaper00061651:AMso_enriched
      WBPaper00061651:Coelomocyte_enriched
      WBPaper00061651:hmc_enriched
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_noncoding-RNA
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065841:0_0
      WBPaper00065841:11_1
      WBPaper00065841:12_0
      WBPaper00065841:18_0
      WBPaper00065841:30_2
      WBPaper00065841:110_0
      WBPaper00065841:110_1
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4489_group_8
      WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
      WBPaper00025032:cluster_24
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031060:2-deoxy-D-glucose_upregulated
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00036286:Pattern_I
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00040821:Au-NP_regulated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045294:50uM_TBBP_downregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      WBPaper00048989:N2_rapamycin_upregulated
  Map_info: Positive: Positive_clone: ZC513 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 1.00495
  Method: Gene