WormBase Tree Display for Gene: WBGene00017583

WBGene00017583 SMap: S_parent: Sequence: F19B10
  Identity: Version: 1
    Name: Sequence_name: F19B10.1
      Molecular_name: F19B10.1
        F19B10.1.1
        CE09468
      Other_name: F19B10.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_F19B10.1 Accession_evidence: NDB BX284602
      Public_name: F19B10.1
    DB_info: Database: AceView gene 2D975
        WormQTL gene WBGene00017583
        WormFlux gene WBGene00017583
        NDB locus_tag CELE_F19B10.1
        NCBI gene 173713
        RefSeq protein NM_062213.5
        TREEFAM TREEFAM_ID TF343731
        TrEMBL UniProtAcc O02076
        UniProt_GCRP UniProtAcc O02076
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00362236
      WBVar02123360
      WBVar01499702
      WBVar00091072
      WBVar02120788
      WBVar01499894
      WBVar01902539
      WBVar02120618
      WBVar02121724
      WBVar01303407
      WBVar01303413
      WBVar01303421
      WBVar01498435
      WBVar01303422
      WBVar01303426
      WBVar02123020
      WBVar02123572
      WBVar01490713
      WBVar02151085
      WBVar00169750
      WBVar00169751
      WBVar00169752
      WBVar00169753
      WBVar00169754
      WBVar00169755
      WBVar02121372
      WBVar00169756
      WBVar01695410
      WBVar00234349
      WBVar02120458
      WBVar02100589
      WBVar00102887
      WBVar00102888
      WBVar00102889
      WBVar00102890
      WBVar00102891
      WBVar01626233
      WBVar00102892
      WBVar00102893
      WBVar01821050
      WBVar02097662
      WBVar01576816
      WBVar02095639
      WBVar01576817
      WBVar02092145
      WBVar02112396
      WBVar00220804
      WBVar00220806
      WBVar00220809
      WBVar01237188
      WBVar01237191
      WBVar01368420
      WBVar01368421
      WBVar01368438
      WBVar02124940
      WBVar01413204
      WBVar01368567
      WBVar00091193
      WBVar00720756
      WBVar01537667
      WBVar01537668
      WBVar00720757
      WBVar00720758
      WBVar00720759
      WBVar00720760
      WBVar00720761
      WBVar01504618
      WBVar00720762
      WBVar01504619
      WBVar01504620
      WBVar00720763
      WBVar01504621
      WBVar01504622
      WBVar02049426
      WBVar01504623
      WBVar01504624
      WBVar01504625
      WBVar01504626
      WBVar02121846
      WBVar00548812
      WBVar00548813
      WBVar01692020
      WBVar01692021
      WBVar02120934
      WBVar02096646
      WBVar02123884
      WBVar02122782
      WBVar01546622
      WBVar02121133
      WBVar02114328
      WBVar01399943
      WBVar02081026
      WBVar02081027
      WBVar02081028
      WBVar02124458
      WBVar00362232
      WBVar02081029
      WBVar00362233
      WBVar00362234
      WBVar00362235
    RNASeq_FPKM (74)
    Ortholog (15)
    Structured_description: Automated_description: Enriched in several structures, including GLR; germ line; male distal tip cell; muscle cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and tiling array studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F19B10.1
    Corresponding_transcript: F19B10.1.1
    Associated_feature: WBsf644077
      WBsf987337
      WBsf1011948
      WBsf221035
      WBsf221036
      WBsf221037
  Experimental_info: RNAi_result: WBRNAi00031114 Inferred_automatically: RNAi_primary
      WBRNAi00013532 Inferred_automatically: RNAi_primary
      WBRNAi00001025 Inferred_automatically: RNAi_primary
      WBRNAi00044977 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022508
      Expr1037551
      Expr1148946
      Expr2002730
      Expr2020946
    Drives_construct: WBCnstr00027188
    Construct_product: WBCnstr00027188
    Microarray_results (17)
    Expression_cluster: WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_embryo_enriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(gk119)_downregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045257:bar-1(ga80)_upregulated
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_upregulated
      WBPaper00045861:set-2(ok952)_upregulated
      WBPaper00045861:wdr-5(ok1417)_upregulated
      WBPaper00046509:lin-35(n745)_upregulated
      WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
      WBPaper00048690:male-Z1-Z4-daughter_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00050094:glp-1(gf)_upregulated
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050448:KGB-1-induced
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051305:vit-2(ac3)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053909:N2_vs_CB4856_upregulated
      WBPaper00054410:set-26(tm2467)_upregulated
      WBPaper00055354:Allantoin_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056039:ptl-1(ok621)_upregulated
      WBPaper00056039:ptrn-1(tm5597)_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056284:ints-1(RNAi)_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:flcn-1(ok975)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059609:malt-1_ilc-17.1_nfki-1_downregulated
      WBPaper00059763:neuron_expressed
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060634:fhod-1(tm2363)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061340:AVH_parent
      WBPaper00061340:Body_wall_muscle
      WBPaper00061340:Ciliated_non_amphid_neuron
      WBPaper00061340:GLR
      WBPaper00061340:RIA_parent
      WBPaper00061340:RID_parent
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:fbxa-154_11499-Y44A6D.1
      WBPaper00061527:R07E4.5-skp-1_1608
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062056:dpl-1(n2994)_upregulated
      WBPaper00062056:efl-1(se1)_upregulated
      WBPaper00062056:lin-35(n745)_upregulated
      WBPaper00062056:lin-36(we31)_upregulated
      WBPaper00062056:lin-36(we36)_upregulated
      WBPaper00062056:lin-37(n758)_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062456:doxycycline_downregulated_CB4856_transcript
      WBPaper00062456:doxycycline_downregulated_N2_transcript
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064632:daf-2(e1370)_downregulated_intestine
      WBPaper00064716:paraquat_upregulated
      WBPaper00064727:daf-2(e1370)_downregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065149:lin-52(n771)_upregulated
      WBPaper00065835:Day11_vs_Day1_upregulated
      WBPaper00065841:117_0
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:sin-3(tm1276)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_6_1
      WBPaper00025032:cluster_164
      WBPaper00025032:PAL-1_target_genes
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp1
      WBPaper00034739:N2moreDR1350
      WBPaper00034739:RIL17lessRIL14
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00040876:mir-35_upregulated
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041960:daf-16_fasting_upregulated
      WBPaper00041960:jun-1_fasting_upregulated
      WBPaper00041960:kgb-1_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00042234:xpa-1_upregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045960:L1-L4-lethargus_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00048637:lin-35(n745)_starvation_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(41_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction: WBInteraction000031212
      WBInteraction000218078
      WBInteraction000295196
      WBInteraction000512410
      WBInteraction000551144
      WBInteraction000560515
  Map_info: Positive: Positive_clone: F19B10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -6.22898
  Method: Gene