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WormBase Tree Display for Gene: WBGene00015909

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Name Class

WBGene00015909SMapS_parentSequenceC17F4
IdentityVersion2
NameCGC_nameclec-124Person_evidenceWBPerson2531
Sequence_nameC17F4.1
Molecular_nameC17F4.1
C17F4.1.1
CE52403
Other_nameCELE_C17F4.1Accession_evidenceNDBBX284602
Public_nameclec-124
DB_infoDatabaseAceViewgene2D541
WormQTLgeneWBGene00015909
WormFluxgeneWBGene00015909
NDBlocus_tagCELE_C17F4.1
PanthergeneCAEEL|WormBase=WBGene00015909|UniProtKB=O16543
familyPTHR23124
NCBIgene182737
RefSeqproteinNM_001356828.2
TrEMBLUniProtAccO16543
UniProt_GCRPUniProtAccO16543
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-124
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
AlleleWBVar01499702
WBVar02120786
WBVar02123186
WBVar01641909
WBVar02121721
WBVar02120617
WBVar01498435
WBVar02121545
WBVar02124673
WBVar02122098
WBVar02123019
WBVar01801861
WBVar02121370
WBVar01500106
WBVar01235704
WBVar01235705
WBVar01235706
WBVar02124872
WBVar02120456
WBVar01235708
WBVar01685257
WBVar01235709
WBVar01235710
WBVar01557961
WBVar01557962
WBVar02122302
WBVar02119360
WBVar01504168
WBVar00717733
WBVar00717734
WBVar00717735
WBVar00717736
WBVar01821044
WBVar00717737
WBVar00717738
WBVar00717739
WBVar02092133
WBVar02092134
WBVar00717740
WBVar00717741
WBVar00717742
WBVar00717743
WBVar02121950
WBVar00717744
WBVar00717745
WBVar00717746
WBVar01695254
WBVar00361204
WBVar00361205
WBVar00361206
WBVar00361207
WBVar00361208
WBVar00220019
WBVar00220020
WBVar01537250
WBVar00220021
WBVar01244840
WBVar01537251
WBVar01537252
WBVar00220022
WBVar01537253
WBVar00220023
WBVar00220024
WBVar01537254
WBVar01413092
WBVar01537255
WBVar00220025
WBVar00220026
WBVar01537256
WBVar01537257
WBVar00220027
WBVar00220028
WBVar01537258
WBVar01537259
WBVar01537260
WBVar01537261
WBVar01537262
WBVar02122532
WBVar02084630
WBVar02122355
WBVar02084631
WBVar02084632
WBVar02122914
WBVar02124390
WBVar02123659
WBVar02124763
WBVar00102593
WBVar01655280
WBVar01655281
WBVar01500024
WBVar01500025
WBVar02120928
WBVar02122218
WBVar01576712
WBVar00168876
WBVar01301758
WBVar02122780
WBVar00548090
WBVar02121131
WBVar02093896
RNASeq_FPKM (74)
OrthologWBGene00135791Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00119635Caenorhabditis japonicaFrom_analysisInparanoid_8
CSP39.g21785Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
chrII_pilon.g3919Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119598Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-2; lin-4; and lin-14 based on microarray and RNA-seq studies. Is affected by six chemicals including aldicarb; Zidovudine; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17F4.1
Corresponding_CDS_historyC17F4.1:wp261
Corresponding_transcriptC17F4.1.1
Experimental_infoRNAi_resultWBRNAi00040819Inferred_automaticallyRNAi_primary
WBRNAi00112622Inferred_automaticallyRNAi_primary
WBRNAi00010917Inferred_automaticallyRNAi_primary
WBRNAi00029012Inferred_automaticallyRNAi_primary
Expr_patternExpr1014959
Expr1036800
Expr1144860
Microarray_results (15)
Expression_clusterWBPaper00037682:sma-2_downregulated
WBPaper00038061:aldicarb_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00041071:spe-44_downregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050231:male_enriched
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053909:N2_vs_CB4856_downregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055648:male-vas-deferens_expressed
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00061527:srj-42-srw-113
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_18
cgc4489_group_22
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_E
WBPaper00026980:intestine_enriched
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00046548:dafachronic-acid_upregulated
[cgc6390]:male_sex-enriched
Map_infoMapIIPosition-7.19839Error0.045024
PositivePositive_cloneC17F4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene