WormBase Tree Display for Gene: WBGene00011802

WBGene00011802 SMap: S_parent: Sequence: T16G1
  Identity: Version: 1
    Name: Sequence_name: T16G1.9
      Molecular_name: T16G1.9
        T16G1.9.1
        CE20079
        T16G1.9.2
      Other_name: CELE_T16G1.9 Accession_evidence: NDB BX284605
      Public_name: T16G1.9
    DB_info: Database: AceView gene 5N428
        WormQTL gene WBGene00011802
        WormFlux gene WBGene00011802
        NDB locus_tag CELE_T16G1.9
        Panther gene CAEEL|WormBase=WBGene00011802|UniProtKB=Q9U367
          family PTHR24203
        NCBI gene 179778
        RefSeq protein NM_073838.5
        TREEFAM TREEFAM_ID TF316391
        TrEMBL UniProtAcc Q9U367
        UniProt_GCRP UniProtAcc Q9U367
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00278373 Inferred_automatically: From strain object: VC2499
      WBVar01868718
      WBVar01868719
      WBVar01868720
      WBVar01868721
      WBVar01868722
      WBVar01868723
      WBVar01868724
      WBVar01058264
      WBVar01058265
      WBVar01058266
      WBVar01058267
      WBVar01058268
      WBVar01058269
      WBVar01058270
      WBVar01058271
      WBVar01058272
      WBVar01058273
      WBVar01058274
      WBVar01058275
      WBVar01058276
      WBVar01058277
      WBVar01058278
      WBVar01058279
      WBVar01058280
      WBVar01058281
      WBVar01058282
      WBVar01058283
      WBVar02061618
      WBVar01058284
      WBVar01058285
      WBVar01058286
      WBVar01058287
      WBVar01058288
      WBVar01058289
      WBVar01058290
      WBVar01462316
      WBVar02113379
      WBVar01500212
      WBVar01500213
      WBVar02137349
      WBVar01499299
      WBVar00473893
      WBVar00473894
      WBVar00473895
      WBVar00473896
      WBVar00473897
      WBVar00473898
      WBVar00473899
      WBVar00473900
      WBVar01499316
    Strain: WBStrain00037366
    RNASeq_FPKM (74)
    GO_annotation: 00100002
    Ortholog (34)
    Structured_description: Automated_description: Enriched in head mesodermal cell; intestine; mechanosensory neurons; rectal epithelial cell; and terminal bulb based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and hsf-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by four chemicals including Chlorpyrifos; Diazinon; and Humic Substances based on microarray studies. Is predicted to encode a protein with the following domains: Ankyrin repeats (3 copies); Ankyrin repeat; Beta-hexosaminidase-like, domain 2; Ankyrin repeat-containing domain superfamily; and Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T16G1.9
    Corresponding_transcript: T16G1.9.1
      T16G1.9.2
    Other_sequence (44)
    Associated_feature: WBsf669536
      WBsf234749
      WBsf234750
  Experimental_info: RNAi_result: WBRNAi00018774 Inferred_automatically: RNAi_primary
      WBRNAi00000592 Inferred_automatically: RNAi_primary
      WBRNAi00035616 Inferred_automatically: RNAi_primary
      WBRNAi00053419 Inferred_automatically: RNAi_primary
      WBRNAi00108529 Inferred_automatically: RNAi_primary
      WBRNAi00018775 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027621
      Expr1035195
      Expr1156994
      Expr2006212
      Expr2024430
    Drives_construct: WBCnstr00030375
    Construct_product: WBCnstr00030375
    Microarray_results (19)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Spermatogenic
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:nucleus_specific
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_embryo_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053599:mitosis_vs_meiosis_downregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
      WBPaper00055969:electromagnetic-field_downregulated
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00056855:his-72(uge40)_upregulated
      WBPaper00057136:yap-1(ys38)_upregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00059605:MUT-16_interacting
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059987:Wounding_downregulated
      WBPaper00061340:F_U
      WBPaper00061340:g1A_g1P
      WBPaper00061340:K_Kprime
      WBPaper00061340:mc3
      WBPaper00061527:uggt-1_21889-tag-320_20312
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064130:Beta-Amyloid_upregulated_protein
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066085:sin-3(syb2172)_upregulated
      cgc4489_group_16
      cgc4489_group_24
      WBPaper00005475:Aging-regulated
      WBPaper00025032:cluster_156
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00032948:FedUp
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_G
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:Cluster_B
    Interaction (28)
  Map_info: Positive: Positive_clone: T16G1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 4.74442
  Reference: WBPaper00061547
  Method: Gene