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WormBase Tree Display for Gene: WBGene00011545

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Name Class

WBGene00011545SMapS_parentSequenceT06G6
IdentityVersion1
NameSequence_nameT06G6.3
Molecular_nameT06G6.3a
T06G6.3a.1
CE32489
T06G6.3b
CE37142
T06G6.3b.1
Other_nameCELE_T06G6.3Accession_evidenceNDBBX284601
Public_nameT06G6.3
DB_infoDatabaseAceViewgene1N300
WormQTLgeneWBGene00011545
WormFluxgeneWBGene00011545
NDBlocus_tagCELE_T06G6.3
NCBIgene173139
RefSeqproteinNM_001026444.4
NM_001026443.4
TREEFAMTREEFAM_IDTF333232
TrEMBLUniProtAccQ69Z10
O18051
UniProt_GCRPUniProtAccO18051
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01850280
WBVar01850281
WBVar01850282
WBVar01850283
WBVar01288372
WBVar01288375
WBVar01288376
WBVar01499739
WBVar00541206
WBVar01499204
WBVar01831238
WBVar00145914
WBVar02123446
WBVar02016788
WBVar01499999
WBVar00159505
WBVar01433981
WBVar01433982
WBVar01433983
WBVar01433984
WBVar01433985
WBVar01433986
WBVar01433987
WBVar01433988
WBVar01433989
WBVar01433990
WBVar01433991
WBVar00680788
WBVar00680789
WBVar00680790
WBVar00680791
WBVar00680792
WBVar00680793
WBVar00680794
WBVar00680795
WBVar00680796
WBVar00680797
WBVar00680798
WBVar00680799
WBVar00680800
WBVar00254091
WBVar00680801
WBVar00680802
WBVar00680803
WBVar00680804
WBVar00680805
WBVar00680806
WBVar00680807
WBVar00348790
WBVar00348791
WBVar00348792
WBVar00348793
WBVar00348794
WBVar02123349
WBVar00348795
WBVar00348796
WBVar00348797
WBVar00348798
WBVar00348799
WBVar01850277
WBVar01850278
WBVar01850279
StrainWBStrain00036399
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in intestine; neurons; and oxygen sensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; proteomic; and microarray studies. Is affected by several genes including skn-1; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by ten chemicals including Tunicamycin; stavudine; and Zidovudine based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST06G6.3a
T06G6.3b
Corresponding_CDS_historyT06G6.3:wp90
Corresponding_transcriptT06G6.3a.1
T06G6.3b.1
Associated_featureWBsf649677
WBsf985665
WBsf985666
WBsf985667
WBsf985668
WBsf1010952
WBsf220450
Experimental_infoRNAi_resultWBRNAi00035278Inferred_automaticallyRNAi_primary
WBRNAi00052682Inferred_automaticallyRNAi_primary
WBRNAi00000464Inferred_automaticallyRNAi_primary
WBRNAi00004152Inferred_automaticallyRNAi_primary
Expr_patternExpr1014741
Expr1035090
Expr1156288
Expr2005945
Expr2024161
Drives_constructWBCnstr00030572
Construct_productWBCnstr00030572
Microarray_results (18)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_larva_enriched
WBPaper00037950:all-neurons_larva_SelectivelyEnriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:BAG-neuron_embryo_enriched
WBPaper00037950:BAG-neuron_embryo_SelectivelyEnriched
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055103:thoc-5(wy822)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056167:Cry5B_upregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:ADF
WBPaper00061340:AFD
WBPaper00061340:ASE
WBPaper00061340:ASG
WBPaper00061340:ASI
WBPaper00061340:ASJ
WBPaper00061340:ASK
WBPaper00061340:AWA
WBPaper00061340:AWC
WBPaper00061340:BAG
WBPaper00061340:URX
WBPaper00061527:acy-2-F35C5.11
WBPaper00061651:ADF_enriched
WBPaper00061651:AFD_enriched
WBPaper00061651:ASEL_enriched
WBPaper00061651:ASER_enriched
WBPaper00061651:ASG_enriched
WBPaper00061651:ASI_enriched
WBPaper00061651:ASJ_enriched
WBPaper00061651:ASK_enriched
WBPaper00061651:AWB_enriched
WBPaper00061651:AWC_OFF_enriched
WBPaper00061651:AWC_ON_enriched
WBPaper00061818:AFD_enriched_protein
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065258:anchor-cell_enriched
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:35_0
WBPaper00065841:35_1
WBPaper00065841:35_2
WBPaper00065841:35_3
WBPaper00065841:35_4
WBPaper00065841:39_0
WBPaper00065841:39_1
WBPaper00065841:39_2
WBPaper00065841:39_3
WBPaper00065841:47_0
WBPaper00065841:71_0
WBPaper00065841:77_0
WBPaper00065841:84_0
WBPaper00065841:99_0
WBPaper00065841:101_0
WBPaper00065841:106_0
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_9
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00034661:AgNPs_downregulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00039866:SAM_daf-19_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
Interaction (15)
Map_infoPositivePositive_cloneT06G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI13.9525
ReferenceWBPaper00026601
WBPaper00061818
MethodGene