WormBase Tree Display for Gene: WBGene00007944

WBGene00007944 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: Sequence_name: C34F6.10
      Molecular_name (14)
      Other_name: CELE_C34F6.10 Accession_evidence: NDB BX284606
      Public_name: C34F6.10
    DB_info: Database: AceView gene XL848
        WormQTL gene WBGene00007944
        WormFlux gene WBGene00007944
        NDB locus_tag CELE_C34F6.10
        Panther gene CAEEL|WormBase=WBGene00007944|UniProtKB=G5EF49
          family PTHR24020
        NCBI gene 181313
        RefSeq protein NM_001383645.1
            NM_001373500.3
            NM_001383644.1
            NM_001373501.3
        TrEMBL UniProtAcc A0A486WVV5
            A0A486WX36
            A0A486WY49
            G5EF49
        UniProt_GCRP UniProtAcc A0A486WVV5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00067750
      WBVar01499887
      WBVar00067755
      WBVar01499888
      WBVar00067760
      WBVar00516986
      WBVar00516987
      WBVar00516988
      WBVar00516989
      WBVar00516990
      WBVar01499710
      WBVar00516991
      WBVar00516992
      WBVar00516993
      WBVar00516994
      WBVar00516995
      WBVar00516996
      WBVar02009096
      WBVar02009097
      WBVar02009098
      WBVar01497701
      WBVar02009099
      WBVar02009100
      WBVar02009101
      WBVar01186455
      WBVar00309499
      WBVar01186456
      WBVar01186457
      WBVar01186458
      WBVar01186459
      WBVar01186460
      WBVar01186461
      WBVar01186462
      WBVar01186463
      WBVar01928305
      WBVar01186464
      WBVar01186465
      WBVar01186466
      WBVar01186467
      WBVar01620532
      WBVar01186468
      WBVar01620533
      WBVar01186469
      WBVar01620534
      WBVar01186470
      WBVar01186471
      WBVar01186472
      WBVar01186473
      WBVar01186474
      WBVar01186475
      WBVar01186476
      WBVar02099870
      WBVar01186477
      WBVar01186478
      WBVar01186479
      WBVar01186480
      WBVar01186481
      WBVar01186482
      WBVar01186483
      WBVar01186484
      WBVar01186485
      WBVar01471092
      WBVar01186486
      WBVar01186487
      WBVar01471093
      WBVar01471094
      WBVar01186488
      WBVar01186489
      WBVar01471095
      WBVar01186490
      WBVar01471096
      WBVar01471097
      WBVar01186491
      WBVar01186492
      WBVar01471098
      WBVar01498680
      WBVar01471099
      WBVar01186493
      WBVar01186494
      WBVar01186495
      WBVar01186496
      WBVar00255134
      WBVar01186497
      WBVar01186498
      WBVar01186499
      WBVar01186500
      WBVar01186501
      WBVar01186502
      WBVar01186503
      WBVar01759441
      WBVar01186504
      WBVar01186505
      WBVar01186506
      WBVar01186507
      WBVar01186508
      WBVar01186509
      WBVar01186510
      WBVar01186511
      WBVar02144362
      WBVar01527701
      WBVar01186512
      WBVar01186513
      WBVar01186514
      WBVar01186515
      WBVar01186516
      WBVar01186517
      WBVar01186518
      WBVar01186519
      WBVar01186520
      WBVar01186521
      WBVar01186522
      WBVar01186523
      WBVar01186524
      WBVar01981308
      WBVar01186525
      WBVar01981309
      WBVar01186526
      WBVar01186527
      WBVar00236821
      WBVar01186528
      WBVar01186529
      WBVar01186530
      WBVar01186531
      WBVar01186532
      WBVar01186533
      WBVar01186534
      WBVar01186535
      WBVar01825910
      WBVar01690348
      WBVar01690349
      WBVar01690350
      WBVar01690351
      WBVar01690352
      WBVar00310443
      WBVar01690353
      WBVar01690354
      WBVar01690355
      WBVar01690356
      WBVar01690357
      WBVar01690358
      WBVar01690359
      WBVar01690360
      WBVar01690361
      WBVar01690362
      WBVar01690363
      WBVar00256301
      WBVar01690364
      WBVar01787030
      WBVar00067735
      WBVar01602179
      WBVar00067740
      WBVar01498960
      WBVar00067745
      WBVar01500067
    RNASeq_FPKM (74)
    GO_annotation: 00003599
      00003600
      00003601
      00003602
      00003603
      00003604
      00003605
    Ortholog (44)
    Paralog: WBGene00000750 Caenorhabditis elegans From_analysis: Panther
      WBGene00001070 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be involved in axon guidance; cell-cell adhesion; and neuron migration. Predicted to be located in axonal growth cone; cell surface; and plasma membrane. Expressed in RIH and body wall musculature. Is an ortholog of human FNDC3A (fibronectin type III domain containing 3A) and FNDC3B (fibronectin type III domain containing 3B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34F6.10a
      C34F6.10b
      C34F6.10c
      C34F6.10d
    Corresponding_CDS_history: C34F6.10:wp179
      C34F6.10:wp204
    Corresponding_transcript: C34F6.10a.1
      C34F6.10a.2
      C34F6.10b.1
      C34F6.10c.1
      C34F6.10d.1
      C34F6.10d.2
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00029544 Inferred_automatically: RNAi_primary
      WBRNAi00011622 Inferred_automatically: RNAi_primary
      WBRNAi00041918 Inferred_automatically: RNAi_primary
      WBRNAi00000275 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13582
      Expr1021809
      Expr1033450
      Expr1145924
      Expr2001408
      Expr2019631
    Drives_construct: WBCnstr00033364
    Construct_product: WBCnstr00033364
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:Cluster_5
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032976:dosage_compensated_genes
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040209:B.thuringiensis_upregulated_MY15
      WBPaper00040412:germline-regulated_daf-16_target
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Spermatogenic
      WBPaper00048690:gonad-male-biased
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049001:EVN_enriched
      WBPaper00049018:swsn-2.2(RNAi)_downregulated
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050496:unc-39(hp701)_regulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:ash-2(RNAi)_regulated_intestine
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055626:pry-1(mu38)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056034:pals-25(jy9)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057154:HeatShock_upregulated_mRNA
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ALA
      WBPaper00061340:AVK
      WBPaper00061340:Coelomocyte
      WBPaper00061340:hmc
      WBPaper00061340:hmc_and_homolog
      WBPaper00061340:hmc_homolog
      WBPaper00061340:Rectal_cell
      WBPaper00061466:nath-10(icb102)_upregulated
      WBPaper00061527:ldb-1_2877-scd-1_3086
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061651:MI_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:PVW_enriched
      WBPaper00061651:RID_enriched
      WBPaper00061651:RIV_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VC_4_5_enriched
      WBPaper00061651:VC_enriched
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065841:59_0
      WBPaper00065841:76_0
      WBPaper00065841:133_0
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066085:sin-3(tm1276)_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4489_group_5
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025032:cluster_44
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00036286:Pattern_I
      WBPaper00037695:LD_3-day
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc6390]:Cluster_B
    Interaction: WBInteraction000235912
      WBInteraction000261386
      WBInteraction000291076
      WBInteraction000357774
      WBInteraction000372700
  Map_info: Positive: Positive_clone: C34F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 2.86411
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene