WormBase Tree Display for Expression_cluster: WBPaper00045316:miRNA_prg-1_L4_vs_L3_upregulated_adult

WBPaper00045316:miRNA_prg-1_L4_vs_L3_upregulated_adult Description: miRNA with increased expression in prg-1(wm161) L4 larva comparing to in prg-1(wm161) L3 larva.
  Species: Caenorhabditis elegans
  Algorithm: DEGseq and GFOLD were used to analyze miRNAs expression. Authors chose miRNAs which had more than two-fold difference in expression (P < 0.001, q < 0.01 of Storey) from DEGseq, and miRNAs which had more than two-fold difference in expression (GFOLD score > 0 for up-regulation and GFOLD score < 0 for down-regulation) from GFOLD outcomes. Then authors obtained the intersection of up-regulated miRNAs and down-regulated miRNAs for each stage from the chosen miRNAs, respectively.
  Reference: WBPaper00045316
  Based_on_WB_Release
  Gene: WBGene00003039 p-value: 0
    WBGene00003334 p-value: 0.000000054
    WBGene00003335 p-value: 0
    WBGene00003287 p-value: 1.81508149265842E-005
    WBGene00003313 p-value: 2.91193461242746E-024
    WBGene00003340 p-value: 0.0001560985
    WBGene00003279 p-value: 5.17194664317705E-006
    WBGene00045343 p-value: 0.0002533015
    WBGene00003305 p-value: 2.75702357729356E-016
    WBGene00077716 p-value: 3.58608363187843E-011
    WBGene00219270 p-value: 9.64809789826288E-013
  Attribute_of: RNASeq
  Associated_with: Life_stage: WBls:0000035
      WBls:0000038
      WBls:0000064