WormBase Tree Display for CDS: F02H6.5f
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F02H6.5f | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F02H6 | |||
Structure | Source_exons | 1 | 180 | |||
454 | 552 | |||||
1198 | 1491 | |||||
1658 | 1828 | |||||
1993 | 2100 | |||||
2411 | 2554 | |||||
2985 | 3221 | |||||
DB_info | Database (4) | |||||
Protein_id | CHROMOSOME_IV | CDR32708 | 1 | |||
DB_remark | SQRD-1 protein; contains similarity to Interpro domains IPR015904 (Sulphide quinone-reductase), IPR036188 (FAD/NAD(P)-binding domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson4025 | ||||
Feature_evidence | WBsf027700 | |||||
WBsf128379 | ||||||
Visible | Gene | WBGene00008538 | ||||
Corresponding_transcript | F02H6.5f.1 | |||||
Corresponding_protein | CE49965 | |||||
Corresponding_PCR_product | cenix:66-c4 | |||||
mv_F02H6.5 | ||||||
sjj2_F02H6.5 | ||||||
sjj_F02H6.5 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA | young_adult_Nanopore_Roach_46957 | |||||
L1_Nanopore_Roach_64787 | ||||||
L1_Nanopore_Roach_41140 | ||||||
RNAi_result | WBRNAi00043837 | |||||
Microarray_results (23) | ||||||
Brief_identification | Pyr_redox_2 domain-containing protein | Accession_evidence | UniProt | TR:A0A061ADY3 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 09 May 2014 00:00:00 | WBPerson4025 | ||||
Remark | [140509 gw3] Created this isoform based on the RNASeq splice data and the SL2 SL1 site. | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf027700 | |||||
WBsf128379 | ||||||
From_analysis | RNASeq_Hillier_elegans | |||||
Method | curated |