Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00008538

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00008538SMapS_parentSequenceF02H6
IdentityVersion3
NameCGC_namesqrd-1Person_evidenceWBPerson6493
WBPerson537
Sequence_nameF02H6.5
Molecular_name (18)
Other_nameCELE_F02H6.5Accession_evidenceNDBBX284604
Public_namesqrd-1
DB_infoDatabaseAceViewgene4O987
WormQTLgeneWBGene00008538
WormFluxgeneWBGene00008538
NDBlocus_tagCELE_F02H6.5
PanthergeneCAEEL|WormBase=WBGene00008538|UniProtKB=O62133
familyPTHR10632
NCBIgene178374
RefSeqproteinNM_001307012.3
NM_001268870.4
NM_001307302.3
NM_001268869.4
NM_001268871.3
NM_001307303.3
TREEFAMTREEFAM_IDTF314384
TrEMBLUniProtAccA0A061ADY3
O62133
C6KRP5
M1ZJU1
C6KRP6
M1ZJZ0
UniProt_GCRPUniProtAccO62133
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Apr 2008 17:14:20WBPerson2970Name_changeCGC_namesqr-1
318 Jul 2008 15:34:01WBPerson2970Name_changeCGC_namesqr-1 -> sqrd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsqrd
Allele (95)
StrainWBStrain00003179
WBStrain00000225
WBStrain00000227
WBStrain00000229
WBStrain00000218
WBStrain00000221
WBStrain00052078
RNASeq_FPKM (74)
GO_annotation00000276
00000277
00000278
00000279
00116174
Contained_in_operonCEOP4629
Ortholog (31)
ParalogWBGene00021183Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00045102Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionPredicted to enable FAD binding activity and sulfide:quinone oxidoreductase activity. Predicted to be involved in sulfide oxidation, using sulfide:quinone oxidoreductase. Predicted to be located in mitochondrion. Is an ortholog of human SQOR (sulfide quinone oxidoreductase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSF02H6.5a
F02H6.5b
F02H6.5c
F02H6.5d
F02H6.5e
F02H6.5f
Corresponding_transcriptF02H6.5a.1
F02H6.5b.1
F02H6.5c.1
F02H6.5d.1
F02H6.5e.1
F02H6.5f.1
Other_sequence (51)
Associated_featureWBsf646558
WBsf980910
WBsf998531
WBsf1018623
WBsf229496
Experimental_infoRNAi_resultWBRNAi00043837Inferred_automaticallyRNAi_primary
Expr_patternChronogram2021
Expr1023006
Expr1033720
Expr1147813
Expr2016110
Expr2034345
Drives_constructWBCnstr00003655
WBCnstr00032888
Construct_productWBCnstr00032888
AntibodyWBAntibody00002293
Microarray_results (24)
Expression_cluster (206)
InteractionWBInteraction000398121
WBInteraction000400831
WBInteraction000504997
WBInteraction000519720
WBInteraction000536841
WBInteraction000536843
WBInteraction000536844
WBInteraction000539664
WBInteraction000564292
WBInteraction000568392
Map_infoMapIVPosition11.5916Error0.004319
PositivePositive_cloneF02H6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00039977
WBPaper00042128
WBPaper00048983
WBPaper00055090
WBPaper00059856
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene