WormBase Tree Display for CDS: C41C4.5e
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| C41C4.5e | SMap | S_parent | Sequence | C41C4 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (14) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | H2FLF9 | ||
| UniProt | UniProtAcc | H2FLF9 | ||||
| AlphaFold | entry | H2FLF9 | ||||
| Protein_id | CHROMOSOME_II | CCF23433 | 2 | |||
| DB_remark | UNC-105 protein; contains similarity to Pfam domain PF00858 (Amiloride-sensitive sodium channel); contains similarity to Interpro domains IPR001873 (Epithelial sodium channel), IPR004726 (Degenerin) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
| Visible | Gene | WBGene00006832 | ||||
| Corresponding_transcript | C41C4.5e.1 | |||||
| Corresponding_protein | CE53921 | |||||
| Corresponding_PCR_product | cenix:173-d12 | |||||
| cenix:203-d4 | ||||||
| mv_C41C4.4 | ||||||
| mv_C41C4.5 | ||||||
| sjj_C41C4.5 | ||||||
| Corresponding_oligo_set (24) | ||||||
| Matching_cDNA | adult_Nanopore_Roach_104974 | |||||
| L2_Nanopore_Roach_98532 | ||||||
| L2_Nanopore_Roach_39056 | ||||||
| L1_Nanopore_Roach_69691 | ||||||
| adult_Nanopore_Roach_99460 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00029717 | |||||
| WBRNAi00011833 | ||||||
| WBRNAi00042279 | ||||||
| WBRNAi00090191 | ||||||
| WBRNAi00109150 | ||||||
| WBRNAi00089804 | ||||||
| WBRNAi00042278 | ||||||
| WBRNAi00090032 | ||||||
| WBRNAi00090350 | ||||||
| Microarray_results (28) | ||||||
| Brief_identification | Degenerin-like protein unc-105 | Accession_evidence | UniProt | TR:H2FLF9 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 16 Oct 2019 15:03:57 | WBPerson4025 | ||||
| Remark (2) | ||||||
| Method | curated |
