WormBase Tree Display for CDS: C29E4.3a
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| C29E4.3a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C29E4 | |||
| Structure | Source_exons (11) | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34342 | ||
| UniProtIsoformAcc | P34342-1 | |||||
| UniProt | UniProtAcc | P34342 | ||||
| UniProt_GCRP | UniProtAcc | P34342 | ||||
| AlphaFold | entry | P34342 | ||||
| NCBI_protein | GI_number | GI:351058542 | ||||
| TREEFAM | TREEFAM_ID | TF318283 | ||||
| Protein_id | CHROMOSOME_III | CCD66004 | 1 | |||
| DB_remark | RAN-2 protein; contains similarity to Pfam domain PF13516 (Leucine Rich repeat); contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR027038 (Ran GTPase-activating protein), IPR032675 (Leucine-rich repeat domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | BJ816660 | |||
| Visible | Gene | WBGene00004303 | ||||
| Corresponding_transcript | C29E4.3a.1 | |||||
| Corresponding_protein | CE37483 | |||||
| Corresponding_PCR_product | TH:302a9 | |||||
| cenix:302-a9 | ||||||
| mv_C29E4.3.v5 | ||||||
| sjj2_C29E4.3a | ||||||
| Corresponding_oligo_set | 174985_s_at | |||||
| 187745_at | ||||||
| GPL13394_WBGene00004303 | ||||||
| GPL13914_C29E4.3 | ||||||
| GPL14144_C29E4.3a_2102-2161_0.886_35_C | ||||||
| GPL14144_C29E4.3a_2341-2400_0.917_8_B | ||||||
| GPL14144_C29E4.3a_2693-2752_0.956_1_A | ||||||
| GPL3518_CE30621 | ||||||
| GPL8304_CE_WBGene00004303_A | ||||||
| GPL8673_C29E4_3aP01488 | ||||||
| GPL8673_C29E4_3aP01999 | ||||||
| GPL8673_C29E4_3aP02739 | ||||||
| GPL8673_C29E4_3bP02636 | ||||||
| GPL9450_C29E4.3a | ||||||
| GPL9450_C29E4.3b | ||||||
| cea2.d.14726 | ||||||
| cea2.d.14759 | ||||||
| Matching_cDNA (84) | ||||||
| RNAi_result | WBRNAi00085739 | |||||
| WBRNAi00062934 | ||||||
| WBRNAi00062949 | ||||||
| WBRNAi00001007 | ||||||
| WBRNAi00041448 | ||||||
| WBRNAi00086891 | ||||||
| WBRNAi00062955 | ||||||
| WBRNAi00002456 | ||||||
| WBRNAi00062942 | ||||||
| WBRNAi00065354 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Ran GTPase-activating protein 2 | Accession_evidence | UniProt | SP:P34342 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 10 Sep 2004 00:00:00 | WBPerson1867 | ||||
| Remark | split C29E4.10 off this 99-12-20 | |||||
| [991220 db] split C29E4.3 into .3 and .10 based on EST data | Curator_confirmed | WBPerson1848 | ||||
| [011011 db] truncated C-terminus based on EST data | Curator_confirmed | WBPerson1848 | ||||
| [20040910 po] added a 5' exon based on EST data(yk1624g05.5) | Curator_confirmed | WBPerson1867 | ||||
| WBPerson1848 | ||||||
| Method | curated |
