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WormBase Tree Display for CDS: Y60A3A.18

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Name Class

Y60A3A.18EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY60A3A
StructureSource_exons163
121366
439609
DB_infoDatabaseTrEMBLUniProtAccQ9U1Y9
UniProtUniProtAccQ9U1Y9
UniProt_GCRPUniProtAccQ9U1Y9
AlphaFoldentryQ9U1Y9
NCBI_proteinGI_numberGI:6425369
TREEFAMTREEFAM_IDTF354233
Protein_idCHROMOSOME_VCAB604021
DB_remarkSKR-4 protein; contains similarity to Pfam domains PF01466 (Skp1 family, dimerisation domain), PF03931 (Skp1 family, tetramerisation domain); contains similarity to Interpro domains IPR001232 (S-phase kinase-associated protein 1-like), IPR036296 (SKP1-like, dimerisation domain superfamily), IPR016072 (SKP1 component, dimerisation), IPR016897 (S-phase kinase-associated protein 1), IPR011333 (SKP1/BTB/POZ domain superfamily), IPR016073 (SKP1 component, POZ domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004810
Corresponding_transcriptY60A3A.18.1
Corresponding_proteinCE24523
Corresponding_PCR_productcenix:215-c5
mv_F44G3.6_1
Corresponding_oligo_set (15)
Matching_cDNA (25)
RNAi_resultWBRNAi00069084
WBRNAi00086783
WBRNAi00057808
WBRNAi00086782
WBRNAi00086801
WBRNAi00069085
Microarray_results (15)
Brief_identificationSkp1-related proteinAccession_evidenceUniProtTR:Q9U1Y9
RNASeq_FPKM (74)
Associated_featureWBsf023287
Methodcurated