WormBase Tree Display for Sequence: Y58A7A

Y58A7A DNA: Y58A7A 30781
  SMap: S_child: Gene_child (11)
      CDS_child: Y58A7A.1a 9817 8989
        Y58A7A.1b 10733 8989
        Y58A7A.2 13256 13054
        Y58A7A.2:wp271 13433 13054
        Y58A7A.3 22026 19126
        Y58A7A.4 26209 23246
        Y58A7A.5 28155 27169
        Y58A7A.5:wp262 28323 27169
        Y58A7A.6 30679 28831
        Y58A7A.6:wp112 30679 28962
        Y58A7A.6:wp220 30679 28962
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g39_x11_V_m 9835 8992
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25n11_x11_V_m 22026 21662
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g85_x11_V_m 23905 23672
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g75_x11_V_m 29063 28989
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g69_x11_V_m 30613 30506
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g34_x11_V_m 19779 19129
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25n12_x11_V_m 21763 21665
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g39n11_x11_V_m 10733 9751
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g62_x11_V_m 19779 19588
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g85_x11_V_m 29546 29463
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g33n11_x11_V_m 9835 8992
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g74_x11_V_m 29063 28840
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g1n11_x11_V_m 10733 8992
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g83_x11_V_m 29546 28849
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g3n11_x11_V_m 9835 9751
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g8n11_x11_V_m 1065 1009
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g124_x11_V_m 19779 19711
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g120_x11_V_m 13173 13046
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g116_x11_V_m 5135 4034
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g26n11_x11_V_m 5979 5273
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g96_x11_V_m 1516 1348
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g124_x11_V_m 3171 3039
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g53_x11_V_m 29063 28846
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g70_x11_V_m 29546 29421
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g99_x11_V_m 13256 13090
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g89_x11_V_m 3461 3346
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g69_x11_V_m 2900 2806
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g12n11_x11_V_m 10733 8992
        RNASEQ_embryo_him-8_20dC_post-L1_g53_x11_V_m 22026 21668
        RNASEQ_embryo_him-8_20dC_post-L1_g51_x11_V_m 3533 2821
        RNASEQ_embryo_him-8_20dC_post-L1_g33_x11_V_m 13256 13057
        RNASEQ_embryo_him-8_20dC_post-L1_g19n11_x11_V_m 10733 9330
        RNASEQ_embryo_him-8_20dC_post-L1_g18n11_x11_V_m 5979 3890
        RNASEQ_embryo_him-8_20dC_post-L1_g50_x11_V_m 23905 23252
        RNASEQ_embryo_him-8_20dC_post-L1_g32_x11_V_m 19779 19369
        RNASEQ_embryo_him-8_20dC_post-L1_g48_x11_V_m 615 502
        RNASEQ_embryo_him-8_20dC_post-L1_g57_x11_V_m 2584 2228
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g27_x11_V_m 19779 19129
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g2n11_x11_V_m 10733 8992
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g83_x11_V_m 30676 30506
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g25n11_x11_V_m 22026 21665
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g43_x11_V_m 13433 13057
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g90_x11_V_m 29063 28834
        RNASEQ_L4_soma_JK1107_no_DNaseI_g57_x11_V_m 19779 19129
        RNASEQ_L4_soma_JK1107_no_DNaseI_g8n11_x11_V_m 9835 9751
        RNASEQ_L4_soma_JK1107_no_DNaseI_g39n11_x11_V_m 22026 21719
        RNASEQ_L4_soma_JK1107_no_DNaseI_g49_x11_V_m 1065 1009
        RNASEQ_L4_soma_JK1107_no_DNaseI_g7n11_x11_V_m 13256 13057
        RNASEQ_L4_soma_JK1107_no_DNaseI_g18n11_x11_V_m 5979 2621
        RNASEQ_L4_soma_JK1107_no_DNaseI_g2n11_x11_V_m 10733 8992
        RNASEQ_L4_soma_JK1107_no_DNaseI_g56_x11_V_m 30616 30461
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g33n12_x11_V_m 21763 21665
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g33n11_x11_V_m 22026 21662
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g28_x11_V_m 19779 19129
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g9n11_x11_V_m 10733 8992
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g71_x11_V_m 13256 13057
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g58e6k129_x11_V_m 615 502
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g15n11_x11_V_m 5979 2324
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g36_x11_V_m 29546 28834
        RNASEQ_early_embryo_g43_x11t1_V_m 13256 13057
        RNASEQ_early_embryo_g75_x11_V_m 29546 28992
        RNASEQ_early_embryo_g67_x11_V_m 21757 21677
        RNASEQ_early_embryo_g25n11_x11_V_m 10733 8992
        RNASEQ_early_embryo_g81_x11_V_m 19779 19159
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g34_x11t1_V_m 13256 13057
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g25n11_x11_V_m 10733 8992
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g38_x11_V_m 22026 21665
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g36_x11_V_m 19779 19129
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g74_x11_V_m 29546 28870
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g90_x11_V_m 23905 23255
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g22n11_x11_V_m 30679 28834
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g63_x11_V_m 19886 19129
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11_x11_V_m 10740 9873
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g46n11_x11_V_m 22026 21656
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g35_x11_V_m 9835 8992
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g29n11_x11_V_m 13256 13057
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g1n11_x11_V_m 10733 8992
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g59_x11_V_m 29546 28861
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g56_x11_V_m 19779 19129
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g37n11_x11_V_m 22026 21662
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g37n12_x11_V_m 21763 21665
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g100_x11_V_m 29546 29385
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g70_x11_V_m 19779 19129
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g87_x11_V_m 29063 28965
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g9n11_x11t1_V_m 10733 8992
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g90_x11_V_m 30631 30455
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g48_x11_V_m 22026 21671
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g14n11_x11t1_V_m 13256 13057
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g2n11_x11t1_V_m 10733 8992
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g48_x11_V_m 19779 19159
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g58n11_x11_V_m 22026 21668
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g52e8k52_x11_V_m 2647 2363
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g32n11_x11t1_V_m 9835 9751
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g52_x11_V_m 3970 151
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g38_x11_V_m 19779 19129
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g21n11_x11_V_m 10733 8992
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g44n11_x11_V_m 9835 9751
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g72_x11_V_m 23905 23639
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g19n11_x11_V_m 22026 21671
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g10n11_x11_V_m 5979 5115
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g71_x11_V_m 2464 2186
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g65_x11_V_m 5108 4001
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g70_x11_V_m 13173 13046
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g33n11_x11_V_m 22026 21665
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g49_x11_V_m 3970 2534
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g31_x11_V_m 19779 19132
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g22n11_x11_V_m 10733 8998
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11_x11_V_m 22026 21668
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n12_x11_V_m 21763 21671
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104_x11_V_m 29546 28989
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g15n11_x11_V_m 10733 8992
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g37_x11_V_m 19779 19129
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g60_x11_V_m 30613 30479
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g93_x11_V_m 13256 13057
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g36n11_x11_V_m 1065 1009
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g12n11e4k78_x11_V_m 4088 3848
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g42n11_x11_V_m 9835 9751
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g110_x11_V_m 13256 13057
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g43_x11_V_m 19779 19129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g18n11_x11_V_m 10733 8992
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g65_x11_V_m 29546 28861
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g89_x11_V_m 23905 23852
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g27n12_x11_V_m 21763 21665
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g72_x11_V_m 30634 30473
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g27n11_x11_V_m 22026 21662
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g60_x11_V_m 21757 21662
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g54_x11_V_m 19779 19129
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g9n11_x11t1_V_m 10733 8992
        Y58A7A.gc1 5979 57
        Y58A7A.gc2 10733 8989
        Y58A7A.gc3 22283 19126
        Y58A7A.gc4 26209 23246
        Y58A7A.gc5 28155 26302
        Y58A7A.gc6 30743 28264
        ContigV.elegans.jigsaw.1254.mRNA1254 22105 19054
        ContigV.elegans.jigsaw.1253.mRNA1253 9817 8929
        ContigV.elegans.jigsaw.1257.mRNA1257 30743 28808
        ContigV.elegans.jigsaw.1255.mRNA1255 26225 23191
        ContigV.elegans.jigsaw.1256.mRNA1256 28183 26910
        AG1201_K11D12.10.T3 3533 1589
        AG1201_K11D12.10.T4 3533 1589
        AG1201_K11D12.10.T2 5979 1589
        AG1201_RIT5P.3366.T1 3332 3867
        AG1201_K11D12.10.T1 5979 5058
        AG1201_Y58A7A.1.T4 9835 8989
        AG1201_Y58A7A.1.T1 10733 8989
        AG1201_Y58A7A.2.T1 13182 13054
        AG1201_Y58A7A.2.T3 13256 13054
        AG1201_Y58A7A.2.T2 13433 13054
        AG1201_Y58A7A.2.T6 13256 13107
        AG1201_Y58A7A.3.T5 19886 19126
        AG1201_Y58A7A.3.T3 22026 20592
        AG1201_Y58A7A.3.T1 22026 20595
        AG1201_Y58A7A.4.T1 26209 23246
        AG1201_Y58A7A.5.T1 28155 27169
        AG1201_Y58A7A.6.T1 30679 28831
      Transcript (13)
      Genomic_non_canonical: WRM062aH11 9468 27776
        WRM069dH12 2106 25619
        WRM0615aH03 893 21753
        WRM0623bG01 2562 24191
        WRM0635dF09 10259 29054
      PCR_product (19)
      Allele (501)
      Oligo_set: Aff_Y58A7A.A 30538 28962
        Aff_Y58A7A.B 23845 23246
        Aff_Y58A7A.C 19725 19126
        Aff_Y58A7A.D 13256 13054
        Aff_Y58A7A.E 9817 8989
      Feature_object (247)
      Feature_data: Y58A7A:Polysome 1 30781
        Y58A7A:TranscriptionallyActiveRegion 1 30781
        Y58A7A:ChIPSeqTF 1 30781
        Y58A7A:TRF 1 30781
        Y58A7A:Dust 1 30781
        Y58A7A:inverted 1 30781
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: C04F5 30582
    Overlap_left: K11D12
    Clone_left_end: C04F5 30582
    Clone_right_end: K11D12 1131
  DB_info: Database: EMBL NDB_AC FO080343
        NDB_ID _AC006807
        NDB_SV FO080343.1
    Secondary_accession: AC006807
    DB_remark: The 5' clone is K11D12, 6031 bp overlap; the 3' clone is C04F5, 200 bp overlap. Actual start of this clone is at base position 37383 of C13D9; actual end is at 20440 of F14F9.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Holmes A
      Geisel C
      Elliott G
    From_laboratory: RW
    Date: 21 Aug 1998 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: Y58A7A
  Properties: Genomic_canonical
    Checksum: MD5: 0208989e2c592ebf04baab7ee0730c84
    Status: Finished
      Submitted: 21 Aug 1998 00:00:00
  Map: Sequence-V
  Interpolated_map_position: V -2.91519
  Method: Genomic_canonical