WormBase Tree Display for CDS: Y58A7A.3
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| Y58A7A.3 | SMap | S_parent | Sequence | Y58A7A | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 204 | |||
| 264 | 1243 | |||||
| 1288 | 1431 | |||||
| 1478 | 1916 | |||||
| 1964 | 2189 | |||||
| 2243 | 2901 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q966A6 | ||
| UniProt | UniProtAcc | Q966A6 | ||||
| UniProt_GCRP | UniProtAcc | Q966A6 | ||||
| AlphaFold | entry | Q966A6 | ||||
| NCBI_protein | GI_number | GI:351021016 | ||||
| TREEFAM | TREEFAM_ID | TF317685 | ||||
| Protein_id | CHROMOSOME_V | CCD63022 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01485 (IBR domain, a half RING-finger domain); contains similarity to Interpro domain IPR002867 (IBR domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00021977 | ||||
| Corresponding_transcript | Y58A7A.3.1 | |||||
| Y58A7A.3.2 | ||||||
| Corresponding_protein | CE26196 | |||||
| Corresponding_PCR_product | cenix:170-e9 | |||||
| mv_Y58A7A.c | ||||||
| sjj2_Y58A7A.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (39) | ||||||
| RNAi_result | WBRNAi00037620 | |||||
| WBRNAi00057726 | ||||||
| WBRNAi00057728 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | IBR domain-containing protein | Accession_evidence | UniProt | TR:Q966A6 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf019551 | |||||
| WBsf130693 | ||||||
| Method | curated |
