WormBase Tree Display for CDS: Y53C12B.2
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| Y53C12B.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y53C12B | |||
| Structure | Source_exons | 1 | 49 | |||
| 119 | 219 | |||||
| 639 | 956 | |||||
| 1005 | 1100 | |||||
| 2411 | 2528 | |||||
| 2580 | 2663 | |||||
| 3428 | 3495 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O18216 | ||
| UniProt | UniProtAcc | O18216 | ||||
| UniProt_GCRP | UniProtAcc | O18216 | ||||
| AlphaFold | entry | O18216 | ||||
| NCBI_protein | GI_number | GI:3881134 | ||||
| TREEFAM | TREEFAM_ID | TF300114 | ||||
| Protein_id | CHROMOSOME_II | CAB16491 | 1 | |||
| DB_remark | PNO-1 protein; contains similarity to Interpro domains IPR004087 (K Homology domain), IPR036612 (K Homology domain, type 1 superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013144 | ||||
| Corresponding_transcript | Y53C12B.2.1 | |||||
| Corresponding_protein | CE14896 | |||||
| Corresponding_PCR_product | cenix:152-f12 | |||||
| mv_Y53C12B.2 | ||||||
| sjj_Y53C12B.2 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (96) | ||||||
| RNAi_result | WBRNAi00076812 | |||||
| WBRNAi00057256 | ||||||
| WBRNAi00075896 | ||||||
| WBRNAi00009378 | ||||||
| WBRNAi00037405 | ||||||
| WBRNAi00106944 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | RNA-binding protein pno-1 | Accession_evidence | UniProt | SP:O18216 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf009453 | |||||
| Method | curated |
