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WormBase Tree Display for Gene: WBGene00013144

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Name Class

WBGene00013144SMapS_parentSequenceY53C12B
IdentityVersion2
NameCGC_namepno-1Person_evidenceWBPerson260
Sequence_nameY53C12B.2
Molecular_nameY53C12B.2
Y53C12B.2.1
CE14896
Other_nameCELE_Y53C12B.2Accession_evidenceNDBBX284602
Public_namepno-1
DB_infoDatabaseAceViewgene2K30
WormQTLgeneWBGene00013144
WormFluxgeneWBGene00013144
NDBlocus_tagCELE_Y53C12B.2
PanthergeneCAEEL|WormBase=WBGene00013144|UniProtKB=O18216
familyPTHR12826
NCBIgene174534
RefSeqproteinNM_063698.5
SwissProtUniProtAccO18216
TREEFAMTREEFAM_IDTF300114
UniProt_GCRPUniProtAccO18216
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
213 Nov 2017 15:54:28WBPerson1983Name_changeCGC_namepno-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpno
Allele (61)
StrainWBStrain00051193
WBStrain00051907
RNASeq_FPKM (74)
GO_annotation00031500
00031501
00031502
00031503
00031504
00031505
00031506
00119859
00119860
Contained_in_operonCEOP2452
Ortholog (36)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human PNO1 (partner of NOB1 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSY53C12B.2
Corresponding_transcriptY53C12B.2.1
Other_sequence (80)
Associated_featureWBsf665965
WBsf665966
WBsf665967
WBsf989133
WBsf1012894
WBsf223699
WBsf223700
WBsf223701
Experimental_infoRNAi_resultWBRNAi00076812Inferred_automaticallyRNAi_primary
WBRNAi00057256Inferred_automaticallyRNAi_primary
WBRNAi00075896Inferred_automaticallyRNAi_primary
WBRNAi00009378Inferred_automaticallyRNAi_primary
WBRNAi00037405Inferred_automaticallyRNAi_primary
WBRNAi00106944Inferred_automaticallyRNAi_primary
Expr_patternExpr1027618
Expr1035835
Expr1160693
Expr2007837
Expr2026077
Drives_constructWBCnstr00029745
Construct_productWBCnstr00029745
Microarray_results (15)
Expression_cluster (100)
Interaction (194)
Map_infoMapIIPosition1.70646
PositivePositive_cloneY53C12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00049828
WBPaper00055090
WBPaper00058216
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene