WormBase Tree Display for CDS: Y105C5B.15a
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Y105C5B.15a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y105C5B | |||
Structure | Source_exons | 1 | 136 | |||
576 | 737 | |||||
1213 | 1487 | |||||
2053 | 2553 | |||||
2692 | 2871 | |||||
DB_info | Database | KEGG | KEGG_id | 3.1.3.2 | ||
TrEMBL | UniProtAcc | Q9U309 | ||||
UniProt | UniProtAcc | Q9U309 | ||||
UniProt_GCRP | UniProtAcc | Q9U309 | ||||
AlphaFold | entry | Q9U309 | ||||
NCBI_protein | GI_number | GI:6425223 | ||||
Protein_id | CHROMOSOME_IV | CAB60319 | 1 | |||
DB_remark | contains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF14008 (Iron/zinc purple acid phosphatase-like protein C), PF16656 (Purple acid Phosphatase, N-terminal domain); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR008963 (Purple acid phosphatase-like, N-terminal), IPR015914 (Purple acid phosphatase, N-terminal), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR025733 (Iron/zinc purple acid phosphatase-like C-terminal domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson4025 | ||||
Visible | Gene | WBGene00013654 | ||||
Corresponding_transcript | Y105C5B.15a.1 | |||||
Corresponding_protein | CE24064 | |||||
Corresponding_PCR_product | cenix:38-e12 | |||||
mv_Y105C5B.15 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (41) | ||||||
RNAi_result | WBRNAi00055192 | |||||
WBRNAi00036471 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Purple acid phosphatase | Accession_evidence | UniProt | TR:Q9U309 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 12 Jun 2014 00:00:00 | WBPerson4025 | ||||
Method | curated |